RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 HRO43593 1189 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 KDM1AO60341 852 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 VIPP01282 170 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ALDOCP09972 364 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 C1GALT1C1LP0DN25 315 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 T-ENOLP0DO92 83 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CASP2P42575 452 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 KRT72Q14CN4 511 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ELOCQ15369 112 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 TBCCQ15814 346 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 NXPE4Q6UWF7 544 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 TRIM48Q8IWZ4 208 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 NAGSQ8N159 534 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SFRP1Q8N474 314 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 OR4E2Q8NGC2 313 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 HMGCLL1Q8TB92 370 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 LMX1AQ8TE12 382 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 LCN9Q8WX39 176 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PTCD3Q96EY7 689 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ZNF385DQ9H6B1 395 aa14.24□□□□□ -0.13
CDK5RAP3-201ENST00000338399 OR5K4A6NMS3 321 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SLC28A1O00337 649 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 GPR37L1O60883 481 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PRR35P0CG20 571 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CDH1P12830 882 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 XRCC1P18887 633 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 KLF10Q13118 480 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 E2F2Q14209 437 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 NR6A1Q15406 480 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PLK5Q496M5 336 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ATP6AP1LQ52LC2 224 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 FRG2Q64ET8 278 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ATG9BQ674R7 924 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 RNF165Q6ZSG1 346 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 TRIM46Q7Z4K8 759 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 C11orf74Q86VG3 221 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 HOMEZQ8IX15 550 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CPSF7Q8N684 471 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SLC37A2Q8TED4 501 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ZDHHC1Q8WTX9 485 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 NSL1Q96IY1 281 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 FRG2BQ96QU4 278 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PCBD2Q9H0N5 130 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 TMEM74BQ9NUR3 256 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CPNE7Q9UBL6 633 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SPASTQ9UBP0 616 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 FBXO4Q9UKT5 387 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SLC12A4Q9UP95 1085 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CCL27Q9Y4X3 112 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 CAPN7Q9Y6W3 813 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 TMEM131Q92545 1883 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 KIR2DS5A0A0G2JLQ3 304 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 A0A0G2JNG1 304 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 A0A1B0GVT2 93 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 B4DGG1 531 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 H0YIV9 168 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 KIR2DS3K7RE56 304 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 RGS14O43566 566 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SHMT2P34897 504 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 HMGCS1Q01581 520 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 MEF2AQ02078 507 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SLBPQ14493 270 aaKnown RBP eCLIP14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 KIR2DS5Q14953 304 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 TEAD4Q15561 434 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 IMPG1Q17R60 797 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 C6orf136Q5SQH8 315 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 AMIGO1Q86WK6 493 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 C17orf64Q86WR6 236 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 GKN2Q86XP6 184 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 RNF175Q8N4F7 328 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 WDR20Q8TBZ3 569 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 WDR34Q96EX3 536 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SPNS1Q9H2V7 528 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 EHD1Q9H4M9 534 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SLC40A1Q9NP59 571 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 GEMIN8Q9NWZ8 242 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 DOLKQ9UPQ8 538 aa14.23□□□□□ -0.13
CDK5RAP3-201ENST00000338399 HEATR5BQ9P2D3 2071 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 A0A1B0GTW7 788 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 LSM1O15116 133 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SDC3O75056 442 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 UNC5CO95185 931 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SLC2A4P14672 509 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SCTRP47872 440 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 HNRNPKP61978 463 aaKnown RBP eCLIP14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 UBE2IP63279 158 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 DDX39BQ13838 428 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 GPR18Q14330 331 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 PLCL1Q15111 1095 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 AP5B1Q2VPB7 878 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ICE2Q659A1 982 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 OGFOD2Q6N063 350 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 FNDC5Q8NAU1 212 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 OR2A1Q8NGT9 310 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 TUBB6Q9BUF5 446 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 EFCAB11Q9BUY7 163 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 C1orf50Q9BV19 199 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 ACPTQ9BZG2 426 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 SRMSQ9H3Y6 488 aa14.22□□□□□ -0.13
CDK5RAP3-201ENST00000338399 TXLNGQ9NUQ3 528 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms