RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 KCNE2Q9Y6J6 123 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 CEPT1Q9Y6K0 416 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 PRUNE2Q8WUY3 3088 aa8.01□□□□□ -1.13
HPS4-201ENST00000336873 TRAV19A0A0A6YYK7 116 aa8□□□□□ -1.13
HPS4-201ENST00000336873 A0A0J9YVX5 310 aa8□□□□□ -1.13
HPS4-201ENST00000336873 MAGEB17A8MXT2 336 aa8□□□□□ -1.13
HPS4-201ENST00000336873 E2F3O00716 465 aa8□□□□□ -1.13
HPS4-201ENST00000336873 TEX28O15482 410 aa8□□□□□ -1.13
HPS4-201ENST00000336873 HOXA2O43364 376 aa8□□□□□ -1.13
HPS4-201ENST00000336873 PAPSS2O95340 614 aaPredicted RBP8□□□□□ -1.13
HPS4-201ENST00000336873 C1QCP02747 245 aa8□□□□□ -1.13
HPS4-201ENST00000336873 SYN1P17600 705 aa8□□□□□ -1.13
HPS4-201ENST00000336873 PFKLP17858 780 aa8□□□□□ -1.13
HPS4-201ENST00000336873 MATN1P21941 496 aa8□□□□□ -1.13
HPS4-201ENST00000336873 PIGAP37287 484 aa8□□□□□ -1.13
HPS4-201ENST00000336873 NSG1P42857 185 aa8□□□□□ -1.13
HPS4-201ENST00000336873 ACADVLP49748 655 aa8□□□□□ -1.13
HPS4-201ENST00000336873 NKX2-5P52952 324 aaPredicted RBP8□□□□□ -1.13
HPS4-201ENST00000336873 CD47Q08722 323 aa8□□□□□ -1.13
HPS4-201ENST00000336873 SMARCB1Q12824 385 aa8□□□□□ -1.13
HPS4-201ENST00000336873 RAPSNQ13702 412 aa8□□□□□ -1.13
HPS4-201ENST00000336873 CYP2A13Q16696 494 aa8□□□□□ -1.13
HPS4-201ENST00000336873 ZBED5Q49AG3 693 aa8□□□□□ -1.13
HPS4-201ENST00000336873 PABPC1LQ4VXU2 614 aaKnown RBP8□□□□□ -1.13
HPS4-201ENST00000336873 DGKKQ5KSL6 1271 aa8□□□□□ -1.13
HPS4-201ENST00000336873 OLIG3Q7RTU3 272 aa8□□□□□ -1.13
HPS4-201ENST00000336873 PROSER1Q86XN7 944 aa8□□□□□ -1.13
HPS4-201ENST00000336873 EPHX4Q8IUS5 362 aa8□□□□□ -1.13
HPS4-201ENST00000336873 VRK3Q8IV63 474 aa8□□□□□ -1.13
HPS4-201ENST00000336873 CNTN4Q8IWV2 1026 aa8□□□□□ -1.13
HPS4-201ENST00000336873 CAMKK1Q8N5S9 505 aa8□□□□□ -1.13
HPS4-201ENST00000336873 LZICQ8WZA0 190 aa8□□□□□ -1.13
HPS4-201ENST00000336873 TFAP2CQ92754 450 aa8□□□□□ -1.13
HPS4-201ENST00000336873 MYRFLQ96LU7 910 aa8□□□□□ -1.13
HPS4-201ENST00000336873 BIRC8Q96P09 236 aa8□□□□□ -1.13
HPS4-201ENST00000336873 NUDT4Q9NZJ9 180 aa8□□□□□ -1.13
HPS4-201ENST00000336873 IL17CQ9P0M4 197 aa8□□□□□ -1.13
HPS4-201ENST00000336873 KIAA1522Q9P206 1035 aaPredicted RBP8□□□□□ -1.13
HPS4-201ENST00000336873 MALT1Q9UDY8 824 aa8□□□□□ -1.13
HPS4-201ENST00000336873 ZNF225Q9UK10 706 aa8□□□□□ -1.13
HPS4-201ENST00000336873 FZD4Q9ULV1 537 aa8□□□□□ -1.13
HPS4-201ENST00000336873 LYVE1Q9Y5Y7 322 aa8□□□□□ -1.13
HPS4-201ENST00000336873 PCM1Q15154 2024 aa8□□□□□ -1.13
HPS4-201ENST00000336873 MROH6A6NGR9 719 aa8□□□□□ -1.13
HPS4-201ENST00000336873 SLC28A1O00337 649 aa8□□□□□ -1.13
HPS4-201ENST00000336873 MANBAO00462 879 aa8□□□□□ -1.13
HPS4-201ENST00000336873 TSPAN6O43657 245 aa8□□□□□ -1.13
HPS4-201ENST00000336873 ADAMTS4O75173 837 aa8□□□□□ -1.13
HPS4-201ENST00000336873 PRLP01236 227 aa8□□□□□ -1.13
HPS4-201ENST00000336873 CYP11A1P05108 521 aa8□□□□□ -1.13
HPS4-201ENST00000336873 KLK1P06870 262 aa8□□□□□ -1.13
HPS4-201ENST00000336873 CDKN2CP42773 168 aa8□□□□□ -1.13
HPS4-201ENST00000336873 MAGEA12P43365 314 aa8□□□□□ -1.13
HPS4-201ENST00000336873 SERPINB10P48595 397 aa8□□□□□ -1.13
HPS4-201ENST00000336873 HIST2H2ACQ16777 129 aaPredicted RBP8□□□□□ -1.13
HPS4-201ENST00000336873 PLEKHG6Q3KR16 790 aa8□□□□□ -1.13
HPS4-201ENST00000336873 RUNDC3AQ59EK9 446 aa8□□□□□ -1.13
HPS4-201ENST00000336873 C6orf183Q5T699 404 aa8□□□□□ -1.13
HPS4-201ENST00000336873 KANK2Q63ZY3 851 aa8□□□□□ -1.13
HPS4-201ENST00000336873 HIST2H2AA3Q6FI13 130 aa8□□□□□ -1.13
HPS4-201ENST00000336873 ZNF605Q86T29 641 aa8□□□□□ -1.13
HPS4-201ENST00000336873 ERI1Q8IV48 349 aaKnown RBP8□□□□□ -1.13
HPS4-201ENST00000336873 PELI3Q8N2H9 469 aa8□□□□□ -1.13
HPS4-201ENST00000336873 BCL7CQ8WUZ0 217 aaPredicted RBP8□□□□□ -1.13
HPS4-201ENST00000336873 ASZ1Q8WWH4 475 aa8□□□□□ -1.13
HPS4-201ENST00000336873 PHOX2BQ99453 314 aa8□□□□□ -1.13
HPS4-201ENST00000336873 ARPC5LQ9BPX5 153 aa8□□□□□ -1.13
HPS4-201ENST00000336873 CD244Q9BZW8 370 aa8□□□□□ -1.13
HPS4-201ENST00000336873 ADPRHL2Q9NX46 363 aa8□□□□□ -1.13
HPS4-201ENST00000336873 KCTD5Q9NXV2 234 aa8□□□□□ -1.13
HPS4-201ENST00000336873 CLCA2Q9UQC9 943 aa8□□□□□ -1.13
HPS4-201ENST00000336873 CCL26Q9Y258 94 aa8□□□□□ -1.13
HPS4-201ENST00000336873 TPRKBQ9Y3C4 175 aa8□□□□□ -1.13
HPS4-201ENST00000336873 KRBA1A5PL33 1030 aa8□□□□□ -1.13
HPS4-201ENST00000336873 A8MV72 311 aaPredicted RBP8□□□□□ -1.13
HPS4-201ENST00000336873 NDUFS2O75306 463 aa8□□□□□ -1.13
HPS4-201ENST00000336873 C8orf89P0DMQ9 161 aa8□□□□□ -1.13
HPS4-201ENST00000336873 RRM2P31350 389 aa8□□□□□ -1.13
HPS4-201ENST00000336873 HMGCLP35914 325 aa8□□□□□ -1.13
HPS4-201ENST00000336873 CDK9P50750 372 aaKnown RBP8□□□□□ -1.13
HPS4-201ENST00000336873 MCCD1P59942 119 aaPredicted RBP8□□□□□ -1.13
HPS4-201ENST00000336873 PON2Q15165 354 aa8□□□□□ -1.13
HPS4-201ENST00000336873 CCSMST1Q4G0I0 132 aa8□□□□□ -1.13
HPS4-201ENST00000336873 COLEC12Q5KU26 742 aa8□□□□□ -1.13
HPS4-201ENST00000336873 FRG2Q64ET8 278 aa8□□□□□ -1.13
HPS4-201ENST00000336873 CERS6Q6ZMG9 384 aa8□□□□□ -1.13
HPS4-201ENST00000336873 NCCRP1Q6ZVX7 275 aaPredicted RBP8□□□□□ -1.13
HPS4-201ENST00000336873 CHERPQ8IWX8 916 aaKnown RBP8□□□□□ -1.13
HPS4-201ENST00000336873 SLC34A3Q8N130 599 aa8□□□□□ -1.13
HPS4-201ENST00000336873 GHDCQ8N2G8 530 aa8□□□□□ -1.13
HPS4-201ENST00000336873 PGBD3Q8N328 593 aa8□□□□□ -1.13
HPS4-201ENST00000336873 ZBTB8BQ8NAP8 495 aaPredicted RBP8□□□□□ -1.13
HPS4-201ENST00000336873 MCFD2Q8NI22 146 aa8□□□□□ -1.13
HPS4-201ENST00000336873 STON2Q8WXE9 905 aa8□□□□□ -1.13
HPS4-201ENST00000336873 LINC01599Q8WXQ3 324 aa8□□□□□ -1.13
HPS4-201ENST00000336873 FRG2BQ96QU4 278 aa8□□□□□ -1.13
HPS4-201ENST00000336873 APOL4Q9BPW4 351 aa8□□□□□ -1.13
HPS4-201ENST00000336873 HERC2P3Q9BVR0 1158 aa8□□□□□ -1.13
HPS4-201ENST00000336873 MAGEE1Q9HCI5 957 aa8□□□□□ -1.13
HPS4-201ENST00000336873 MRPS23Q9Y3D9 190 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms