RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 NPEPPSL1A6NEC2 478 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 GRXCR2A6NFK2 248 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 FAM25EA8MYX2 175 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 FOSL1P15407 271 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 SLC15A1P46059 708 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 ELAVL2Q12926 359 aaKnown RBP20.09■□□□□ 0.81
SPNS1-203ENST00000334536 NFYCQ13952 458 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 CAPRIN1Q14444 709 aaKnown RBP20.09■□□□□ 0.81
SPNS1-203ENST00000334536 RFX4Q33E94 735 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 ZC3H12BQ5HYM0 836 aaKnown RBP20.09■□□□□ 0.81
SPNS1-203ENST00000334536 RNF180Q86T96 592 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 ZDHHC13Q8IUH4 622 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 SYTL1Q8IYJ3 562 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 LINC00469Q8N7U9 141 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 SETD9Q8NE22 299 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 MCOLN3Q8TDD5 553 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 TOE1Q96GM8 510 aaKnown RBP20.09■□□□□ 0.81
SPNS1-203ENST00000334536 ZNF578Q96N58 590 aaPredicted RBP20.09■□□□□ 0.81
SPNS1-203ENST00000334536 RBM4BQ9BQ04 359 aaKnown RBP20.09■□□□□ 0.81
SPNS1-203ENST00000334536 RBM4Q9BWF3 364 aaKnown RBP20.09■□□□□ 0.81
SPNS1-203ENST00000334536 ALG2Q9H553 416 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 PRDM8Q9NQV8 689 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 PCDHGA10Q9Y5H3 936 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 TMEM88BA6NKF7 163 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 BTN3A1O00481 513 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 STX7O15400 261 aaKnown RBP20.09■□□□□ 0.81
SPNS1-203ENST00000334536 PDGFAP04085 211 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 DBTP11182 482 aaKnown RBP20.09■□□□□ 0.81
SPNS1-203ENST00000334536 ACADMP11310 421 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 RPL17P18621 184 aaKnown RBP20.09■□□□□ 0.81
SPNS1-203ENST00000334536 HTR1EP28566 365 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 HNF4AP41235 474 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 RGRP47804 291 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 ACLYP53396 1101 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 FOXD4Q12950 439 aaPredicted RBP20.09■□□□□ 0.81
SPNS1-203ENST00000334536 CHST9Q7L1S5 443 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 NLGN4XQ8N0W4 816 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 FCGR1BQ92637 280 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 RPL3LQ92901 407 aaKnown RBP20.09■□□□□ 0.81
SPNS1-203ENST00000334536 TMBIM1Q969X1 311 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 ZSCAN5AQ9BUG6 496 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 MAT2BQ9NZL9 334 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 AGO1Q9UL18 857 aaKnown RBP20.09■□□□□ 0.81
SPNS1-203ENST00000334536 SNX7Q9UNH6 387 aa20.09■□□□□ 0.81
SPNS1-203ENST00000334536 GREB1Q4ZG55 1949 aa20.08■□□□□ 0.81
SPNS1-203ENST00000334536 SLC16A6O15403 523 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 SLC22A3O75751 556 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 GSK3BP49841 420 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 DIO3P55073 304 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 IL2P60568 153 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 ERVK-8P63133 956 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 PRKCZQ05513 592 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 PIGFQ07326 219 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 FAPQ12884 760 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 NXNL2Q5VZ03 156 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 DPY19L3Q6ZPD9 716 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 GPRIN3Q6ZVF9 776 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 GPSM1Q86YR5 675 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 ABI1Q8IZP0 508 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 KBTBD8Q8NFY9 601 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 OVCA2Q8WZ82 227 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 ADGRE3Q9BY15 652 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP20.08■□□□□ 0.8
SPNS1-203ENST00000334536 KLHL21Q9UJP4 597 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 C3orf18Q9UK00 162 aa20.08■□□□□ 0.8
SPNS1-203ENST00000334536 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 A0A1B0GTL3 188 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 ATP6V1G2-DDX39BF2Z307 99 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 TSPAN12O95859 305 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 RAP2AP10114 183 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 PRKAR2AP13861 404 aaKnown RBP20.07■□□□□ 0.8
SPNS1-203ENST00000334536 DUSP4Q13115 394 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 COL19A1Q14993 1142 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 RBBP7Q16576 425 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 LRRC26Q2I0M4 334 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 SPANXN2Q5MJ10 180 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 SDE2Q6IQ49 451 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 SLC22A15Q8IZD6 547 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 GIMAP5Q96F15 307 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 ZNF382Q96SR6 550 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 UGT2B28Q9BY64 529 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 ROGDIQ9GZN7 287 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 C6orf62Q9GZU0 229 aaPredicted RBP20.07■□□□□ 0.8
SPNS1-203ENST00000334536 MARCH5Q9NX47 278 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 ACTL7AQ9Y615 435 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 KCNE2Q9Y6J6 123 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.07■□□□□ 0.8
SPNS1-203ENST00000334536 FAM234BA2RU67 622 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 MEIOCA2RUB1 952 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 H7C0S8 307 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 F11P03951 625 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 RHOCP08134 193 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 PSKH1P11801 424 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 AGXTP21549 392 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 PSMB9P28065 219 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 TGFBR2P37173 567 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 ZFP36L2P47974 494 aaKnown RBP20.07■□□□□ 0.8
SPNS1-203ENST00000334536 SLC35A2P78381 396 aa20.07■□□□□ 0.8
SPNS1-203ENST00000334536 ZNF177Q13360 481 aaPredicted RBP20.07■□□□□ 0.8
SPNS1-203ENST00000334536 SHEQ5VZ18 495 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms