RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 INTS6LQ5JSJ4 861 aaKnown RBP11.56□□□□□ -0.56
LIMK2-202ENST00000333611 UBXN11Q5T124 520 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 TIGD7Q6NT04 549 aaPredicted RBP11.56□□□□□ -0.56
LIMK2-202ENST00000333611 ALKAL1Q6UXT8 129 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 CFAP52Q8N1V2 620 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 C19orf18Q8NEA5 215 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 KBTBD8Q8NFY9 601 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 RAET1EQ8TD07 263 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 SPATA9Q9BWV2 254 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 DYRK4Q9NR20 520 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 ABCB8Q9NUT2 735 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 ACOXLQ9NUZ1 547 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 PEX16Q9Y5Y5 336 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 GOLGA4Q13439 2230 aaKnown RBP11.56□□□□□ -0.56
LIMK2-202ENST00000333611 HMX3A6NHT5 357 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 POM121CA8CG34 1229 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 M0QZ92 97 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 KDM4BO94953 1096 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 S1PR4O95977 384 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 HCAR3P49019 387 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 RENBPP51606 427 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 CDH18Q13634 790 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 MRNIPQ6NTE8 343 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 DENND1CQ8IV53 801 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 TMEM199Q8N511 208 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 VPS37AQ8NEZ2 397 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 GPR21Q99679 349 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 ACTR8Q9H981 624 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 ZFP14Q9HCL3 533 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 ADGRE2Q9UHX3 823 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 PCDHB14Q9Y5E9 798 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 IRAK2O43187 625 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 NTRK1P04629 796 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 ADORA3P0DMS8 318 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 HLA-DPA1P20036 260 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 ALAS2P22557 587 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 DDOSTP39656 456 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 ETV1P50549 477 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 POLR2JP52435 117 aaKnown RBP11.56□□□□□ -0.56
LIMK2-202ENST00000333611 ZNF45Q02386 682 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 RUNDC3AQ59EK9 446 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 GPR153Q6NV75 609 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 IL27RAQ6UWB1 636 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 CNTN4Q8IWV2 1026 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 DCP1BQ8IZD4 617 aaKnown RBP11.56□□□□□ -0.56
LIMK2-202ENST00000333611 TBRG4Q969Z0 631 aaKnown RBP eCLIP11.56□□□□□ -0.564e-6■■■■■ 41.2
LIMK2-202ENST00000333611 DIRAS2Q96HU8 199 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 UHRF1Q96T88 793 aaPredicted RBP11.56□□□□□ -0.56
LIMK2-202ENST00000333611 SERHL2Q9H4I8 314 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 NMUR1Q9HB89 426 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 NLKQ9UBE8 527 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 GMEB2Q9UKD1 530 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 HS3ST4Q9Y661 456 aa11.56□□□□□ -0.56
LIMK2-202ENST00000333611 LINC01387J3KSC0 135 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 M0R129 80 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 GPR39O43194 453 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 PDE9AO76083 593 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 ALPLP05186 524 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 ITGB1P05556 798 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 CNPP09543 421 aaKnown RBP11.55□□□□□ -0.56
LIMK2-202ENST00000333611 CD1DP15813 335 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 DNAJB2P25686 324 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 GPR15P49685 360 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 CDKN1CP49918 316 aaPredicted RBP11.55□□□□□ -0.56
LIMK2-202ENST00000333611 ZNF81P51508 661 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 AIF1P55008 147 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 PTPRRQ15256 657 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 PTPRNQ16849 979 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 CACHD1Q5VU97 1274 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 TRIQKQ629K1 86 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 ZNF772Q68DY9 489 aaPredicted RBP11.55□□□□□ -0.56
LIMK2-202ENST00000333611 LIPIQ6XZB0 460 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 KRT73Q86Y46 540 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 METTL6Q8TCB7 284 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 GPR151Q8TDV0 419 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 RIPOR3Q96MK2 946 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 FAM124BQ9H5Z6 455 aaPredicted RBP11.55□□□□□ -0.56
LIMK2-202ENST00000333611 DIABLOQ9NR28 239 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 KCNH4Q9UQ05 1017 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 LYVE1Q9Y5Y7 322 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 IQCF5A8MTL0 148 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 BBIP1A8MTZ0 92 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 H0YC42 278 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 SLITRK5O94991 958 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 HRGP04196 525 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 ZNF33BQ06732 778 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 C18orf21Q32NC0 220 aaPredicted RBP11.55□□□□□ -0.56
LIMK2-202ENST00000333611 DUSP28Q4G0W2 176 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 ZRANB3Q5FWF4 1079 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 SNX20Q7Z614 316 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 ADAMTSL2Q86TH1 951 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 LRRTM3Q86VH5 581 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 LACC1Q8IV20 430 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 OR10T2Q8NGX3 314 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 ST8SIA4Q92187 359 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 TMEM125Q96AQ2 219 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 MTFMTQ96DP5 389 aaKnown RBP11.55□□□□□ -0.56
LIMK2-202ENST00000333611 SLC47A1Q96FL8 570 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 C12orf57Q99622 126 aa11.55□□□□□ -0.56
LIMK2-202ENST00000333611 TRMOQ9BU70 441 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms