RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 PMS2CLQ68D20 193 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 IYDQ6PHW0 289 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 ACAD11Q709F0 780 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 ACTRT2Q8TDY3 377 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 GAB3Q8WWW8 586 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 AKTIPQ9H8T0 292 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 CCDC177Q9NQR7 707 aaPredicted RBP22.49■■□□□ 1.19
TSEN54-201ENST00000333213 POLG2Q9UHN1 485 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 ICKQ9UPZ9 632 aa22.49■■□□□ 1.19
TSEN54-201ENST00000333213 VILLO15195 856 aa22.48■■□□□ 1.19
TSEN54-201ENST00000333213 SMNDC1O75940 238 aaKnown RBP eCLIP22.48■■□□□ 1.19
TSEN54-201ENST00000333213 GGTA1PQ4G0N0 100 aa22.48■■□□□ 1.19
TSEN54-201ENST00000333213 WDR45BQ5MNZ6 344 aa22.48■■□□□ 1.19
TSEN54-201ENST00000333213 NXNQ6DKJ4 435 aa22.48■■□□□ 1.19
TSEN54-201ENST00000333213 Q6ZSR9 355 aa22.48■■□□□ 1.19
TSEN54-201ENST00000333213 TREML1Q86YW5 311 aa22.48■■□□□ 1.19
TSEN54-201ENST00000333213 CEP70Q8NHQ1 597 aa22.48■■□□□ 1.19
TSEN54-201ENST00000333213 JPH3Q8WXH2 748 aaPredicted RBP22.48■■□□□ 1.19
TSEN54-201ENST00000333213 SPATA7Q9P0W8 599 aa22.48■■□□□ 1.19
TSEN54-201ENST00000333213 STOML1Q9UBI4 398 aa22.48■■□□□ 1.19
TSEN54-201ENST00000333213 ACADSP16219 412 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 ATP6V1C1P21283 382 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 RAB28P51157 221 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 DOC2AQ14183 400 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 E2F2Q14209 437 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 KRT33BQ14525 404 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 CATSPEREQ5SY80 951 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 METTL21CQ5VZV1 264 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 TAF8Q7Z7C8 310 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 NAGSQ8N159 534 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 MIPEPQ99797 713 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 CCDC106Q9BWC9 280 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 CADM1Q9BY67 442 aaKnown RBP22.47■■□□□ 1.19
TSEN54-201ENST00000333213 KCNE2Q9Y6J6 123 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 CD1EP15812 388 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 VARSP26640 1264 aaKnown RBP22.47■■□□□ 1.19
TSEN54-201ENST00000333213 PSMB5P28074 263 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 HMOX2P30519 316 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 AFF3P51826 1226 aaKnown RBP22.47■■□□□ 1.19
TSEN54-201ENST00000333213 IRF8Q02556 426 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 XKR6Q5GH73 641 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 IL27RAQ6UWB1 636 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 SLCO4C1Q6ZQN7 724 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 ARHGAP24Q8N264 748 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 MARK4Q96L34 752 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 ACAT2Q9BWD1 397 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 ZNF385DQ9H6B1 395 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 KIR3DX1Q9H7L2 352 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 CCL27Q9Y4X3 112 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 HEBP2Q9Y5Z4 205 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 COLEC10Q9Y6Z7 277 aa22.47■■□□□ 1.19
TSEN54-201ENST00000333213 CAPN14A8MX76 684 aa22.46■■□□□ 1.19
TSEN54-201ENST00000333213 NCF2P19878 526 aaPredicted RBP22.46■■□□□ 1.19
TSEN54-201ENST00000333213 PKLRP30613 574 aa22.46■■□□□ 1.19
TSEN54-201ENST00000333213 HSD17B2P37059 387 aa22.46■■□□□ 1.19
TSEN54-201ENST00000333213 DHPSP49366 369 aaPredicted RBP22.46■■□□□ 1.19
TSEN54-201ENST00000333213 PLK5Q496M5 336 aa22.46■■□□□ 1.19
TSEN54-201ENST00000333213 USP7Q93009 1102 aa22.46■■□□□ 1.19
TSEN54-201ENST00000333213 GPRC5BQ9NZH0 403 aa22.46■■□□□ 1.19
TSEN54-201ENST00000333213 G3BP2Q9UN86 482 aaKnown RBP22.46■■□□□ 1.19
TSEN54-201ENST00000333213 PRR5-ARHGAP8B1AHC4 643 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 GSC2O15499 205 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 UGDHO60701 494 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 CHEK2O96017 543 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 PRR35P0CG20 571 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 ZRSR2Q15696 482 aaKnown RBP22.45■■□□□ 1.18
TSEN54-201ENST00000333213 PRAMEF13Q5VWM6 474 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 LIPJQ5W064 366 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 LYSMD4Q5XG99 296 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 CHSY3Q70JA7 882 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 TMPRSS11BQ86T26 416 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 HMGCLL1Q8TB92 370 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 MTFMTQ96DP5 389 aaKnown RBP22.45■■□□□ 1.18
TSEN54-201ENST00000333213 CATSPER2Q96P56 530 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 ARL8BQ9NVJ2 186 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 TAC3Q9UHF0 121 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 TNRC6BQ9UPQ9 1833 aaKnown RBP22.45■■□□□ 1.18
TSEN54-201ENST00000333213 MANBAO00462 879 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 ALDOCP09972 364 aaKnown RBP22.45■■□□□ 1.18
TSEN54-201ENST00000333213 JUPP14923 745 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 CASP2P42575 452 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 NEK2P51955 445 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 THEMIS2Q5TEJ8 643 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 LCTLQ6UWM7 567 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 EFL1Q7Z2Z2 1120 aaKnown RBP22.45■■□□□ 1.18
TSEN54-201ENST00000333213 SETD7Q8WTS6 366 aaKnown RBP22.45■■□□□ 1.18
TSEN54-201ENST00000333213 SMPDL3AQ92484 453 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 NELL1Q92832 810 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 TUBGCP3Q96CW5 907 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 CXorf40BQ96DE9 158 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 SLC29A3Q9BZD2 475 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 SPEGQ15772 3267 aa22.45■■□□□ 1.18
TSEN54-201ENST00000333213 A0A1B0GVT2 93 aa22.44■■□□□ 1.18
TSEN54-201ENST00000333213 A6NHS1 94 aa22.44■■□□□ 1.18
TSEN54-201ENST00000333213 ULK1O75385 1050 aa22.44■■□□□ 1.18
TSEN54-201ENST00000333213 SGO1Q5FBB7 561 aa22.44■■□□□ 1.18
TSEN54-201ENST00000333213 ADNP2Q6IQ32 1131 aa22.44■■□□□ 1.18
TSEN54-201ENST00000333213 SFRP1Q8N474 314 aa22.44■■□□□ 1.18
TSEN54-201ENST00000333213 CHCHD4Q8N4Q1 142 aa22.44■■□□□ 1.18
TSEN54-201ENST00000333213 FAM46DQ8NEK8 389 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms