RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 TBC1D3DA0A087WVF3 549 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 TBC1D3IA0A087WXS9 549 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 TBC1D3EA0A087X179 549 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 TBC1D3KA0A087X1G2 549 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 TBC1D3FA6NER0 549 aaPredicted RBP16.39■□□□□ 0.21
DDX41-201ENST00000330503 TBC1D3LB9A6J9 549 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 ETHE1O95571 254 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 PGRP06401 933 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 CEACAM5P06731 702 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 TBC1D3HP0C7X1 549 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 C7P10643 843 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 ACPPP15309 386 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 KELP23276 732 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 PEX2P28328 305 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 MAT2AP31153 395 aaKnown RBP16.39■□□□□ 0.21
DDX41-201ENST00000330503 EEFSECP57772 596 aaKnown RBP16.39■□□□□ 0.21
DDX41-201ENST00000330503 MRPS21P82921 87 aaKnown RBP16.39■□□□□ 0.21
DDX41-201ENST00000330503 TSTA3Q13630 321 aaPredicted RBP16.39■□□□□ 0.21
DDX41-201ENST00000330503 DDX39BQ13838 428 aaKnown RBP16.39■□□□□ 0.21
DDX41-201ENST00000330503 SELPLGQ14242 412 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 LRRC36Q1X8D7 754 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 TBC1D3GQ6DHY5 549 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 TBC1D3CQ6IPX1 549 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 RIMKLAQ8IXN7 391 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 TBC1D3Q8IZP1 549 aaPredicted RBP16.39■□□□□ 0.21
DDX41-201ENST00000330503 C11orf24Q96F05 449 aaPredicted RBP16.39■□□□□ 0.21
DDX41-201ENST00000330503 SIPA1Q96FS4 1042 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 TSSK3Q96PN8 268 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 ZNF184Q99676 751 aaPredicted RBP16.39■□□□□ 0.21
DDX41-201ENST00000330503 PKP2Q99959 881 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 COPS7BQ9H9Q2 264 aaPredicted RBP16.39■□□□□ 0.21
DDX41-201ENST00000330503 FZD3Q9NPG1 666 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 PPT2Q9UMR5 302 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 USP22Q9UPT9 525 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 PCDHGA11Q9Y5H2 935 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 CFAP20Q9Y6A4 193 aaKnown RBP16.39■□□□□ 0.21
DDX41-201ENST00000330503 MAGEB17A8MXT2 336 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 GPR89AB7ZAQ6 455 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 GPR89BP0CG08 455 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 C1GALT1C1LP0DN25 315 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 MYCLP1P12525 358 aaPredicted RBP16.39■□□□□ 0.21
DDX41-201ENST00000330503 PPP2CBP62714 309 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 PPP2CAP67775 309 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 BNIP2Q12982 314 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 TRIP10Q15642 601 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 OGFRL1Q5TC84 451 aaPredicted RBP16.39■□□□□ 0.21
DDX41-201ENST00000330503 ATG9BQ674R7 924 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 IZUMO2Q6UXV1 221 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 PRR23BQ6ZRT6 265 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 TMPRSS11BQ86T26 416 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 SETD7Q8WTS6 366 aaKnown RBP16.39■□□□□ 0.21
DDX41-201ENST00000330503 RAD51AP1Q96B01 352 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 HHIPQ96QV1 700 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 ECSITQ9BQ95 431 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 ALG2Q9H553 416 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 CD93Q9NPY3 652 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 PLEKHM1Q9Y4G2 1056 aa16.39■□□□□ 0.21
DDX41-201ENST00000330503 DFNA5O60443 496 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 RPL10P27635 214 aaKnown RBP16.38■□□□□ 0.21
DDX41-201ENST00000330503 MAPK1P28482 360 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 SF1Q15637 639 aaKnown RBP16.38■□□□□ 0.21
DDX41-201ENST00000330503 SFT2D3Q587I9 215 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 CAPRIN2Q6IMN6 1127 aaKnown RBP16.38■□□□□ 0.21
DDX41-201ENST00000330503 TMEM92Q6UXU6 159 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 CHRDL2Q6WN34 429 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 CHST15Q7LFX5 561 aaPredicted RBP16.38■□□□□ 0.21
DDX41-201ENST00000330503 FAM124AQ86V42 546 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 DCUN1D3Q8IWE4 304 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 MSRB3Q8IXL7 192 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 C2orf73Q8N5S3 287 aaPredicted RBP16.38■□□□□ 0.21
DDX41-201ENST00000330503 TMEM102Q8N9M5 508 aaPredicted RBP16.38■□□□□ 0.21
DDX41-201ENST00000330503 OR5K2Q8NHB8 316 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 HUS1BQ8NHY5 278 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 APOOQ9BUR5 198 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 KLHL4Q9C0H6 718 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 BRF2Q9HAW0 419 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 PREBQ9HCU5 417 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 GEMIN8Q9NWZ8 242 aaKnown RBP16.38■□□□□ 0.21
DDX41-201ENST00000330503 VAPAQ9P0L0 249 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 ACTR3BQ9P1U1 418 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 SLC17A4Q9Y2C5 497 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 WDR37Q9Y2I8 494 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 TDRKHQ9Y2W6 561 aaKnown RBP16.38■□□□□ 0.21
DDX41-201ENST00000330503 DYRK1BQ9Y463 629 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 AP4S1Q9Y587 144 aa16.38■□□□□ 0.21
DDX41-201ENST00000330503 SLC31A1O15431 190 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 ERGP11308 486 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 PCNAP12004 261 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 HSD3B1P14060 373 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 HSD3B2P26439 372 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 SLC7A1P30825 629 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 DMPKQ09013 629 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 MAPKAPK3Q16644 382 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 LCN8Q6JVE9 175 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 MED27Q6P2C8 311 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 NXPE4Q6UWF7 544 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 IFNEQ86WN2 208 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 PTRH1Q86Y79 214 aaKnown RBP16.37■□□□□ 0.21
DDX41-201ENST00000330503 SPPL2CQ8IUH8 684 aa16.37■□□□□ 0.21
DDX41-201ENST00000330503 OR2T34Q8NGX1 318 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms