RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 MVB12AQ96EY5 273 aa16.92■□□□□ 0.3
PTPMT1-201ENST00000326656 ZFYVE21Q9BQ24 234 aa16.92■□□□□ 0.3
PTPMT1-201ENST00000326656 SLC6A20Q9NP91 592 aa16.92■□□□□ 0.3
PTPMT1-201ENST00000326656 PLEKHB1Q9UF11 243 aaPredicted RBP16.92■□□□□ 0.3
PTPMT1-201ENST00000326656 CDC14AQ9UNH5 594 aa16.92■□□□□ 0.3
PTPMT1-201ENST00000326656 COPG1Q9Y678 874 aaKnown RBP16.92■□□□□ 0.3
PTPMT1-201ENST00000326656 FAM237BA0A1B0GVD1 139 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 WIPF3A6NGB9 483 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 MYO1CO00159 1063 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 SEMA7AO75326 666 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 PSIP1O75475 530 aaKnown RBP16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 PKMP14618 531 aaKnown RBP16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 MCM3P25205 808 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 BDKRB1P46663 353 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 OCA2Q04671 838 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 KCNJ11Q14654 390 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 RBBP7Q16576 425 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 FBXO42Q6P3S6 717 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 CES3Q6UWW8 571 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 CILP2Q8IUL8 1156 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 PRELID2Q8N945 189 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 FBXO15Q8NCQ5 510 aaPredicted RBP16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 PRR7Q8TB68 274 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 WDR77Q9BQA1 342 aaPredicted RBP16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 LHPPQ9H008 270 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 AGPAT4Q9NRZ5 378 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 ASF1BQ9NVP2 202 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 SAMD15Q9P1V8 674 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 ZNF282Q9UDV7 671 aaPredicted RBP16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 ZC3H7BQ9UGR2 993 aaKnown RBP16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 CRYL1Q9Y2S2 319 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 PCDHGA10Q9Y5H3 936 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 NOTCH2Q04721 2471 aa16.91■□□□□ 0.3
PTPMT1-201ENST00000326656 IGLV3-12A0A075B6K2 115 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 SDR42E2A6NKP2 422 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 PCDH17O14917 1159 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 PRPF4O43172 522 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 NIPSNAP2O75323 286 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 VPS26AO75436 327 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 CATP04040 527 aaKnown RBP16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 ATXN8OSP0DMR3 200 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 PSMB5P28074 263 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 OR1D4P47884 311 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 FOXL2P58012 376 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 MRPL49Q13405 166 aaKnown RBP16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 PRTGQ2VWP7 1150 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 TTLL9Q3SXZ7 439 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 TUBB8Q3ZCM7 444 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 FRMPD2BQ6IN97 320 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 CENPUQ71F23 418 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 LMNTD2Q8IXW0 634 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 MCUQ8NE86 351 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 OR11G2Q8NGC1 345 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 STT3BQ8TCJ2 826 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 LMF1Q96S06 567 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 DPH7Q9BTV6 452 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 XAB2Q9HCS7 855 aaKnown RBP16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 CTSFQ9UBX1 484 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 RUVBL2Q9Y230 463 aaKnown RBP16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 POLEQ07864 2286 aa16.9■□□□□ 0.3
PTPMT1-201ENST00000326656 HEATR5BQ9P2D3 2071 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 LOC105369274A0A096LPK9 316 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 LOC102723532A0A0G2JNH3 316 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 A0A0J9YVX5 310 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 TCRBV7S3A2A0A539 114 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 ARHGEF33A8MVX0 844 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 GOLGA8KD6RF30 607 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 E5RI56 91 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 GOLGA8TH3BQL2 631 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 TXNDC9O14530 226 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 CCNDBP1O95273 360 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 HPP00738 406 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 ERVK-10P10266 1014 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 RPA3P35244 121 aaPredicted RBP16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 ABATP80404 500 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 PRDX1Q06830 199 aaKnown RBP16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 GPS1Q13098 491 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 ELOAQ14241 798 aaKnown RBP16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 KLHL38Q2WGJ6 581 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 ACSBG2Q5FVE4 666 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 GARNL3Q5VVW2 1013 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 B3GNTL1Q67FW5 361 aaPredicted RBP16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 CUZD1Q86UP6 607 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 CAND1Q86VP6 1230 aaKnown RBP16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 TMEM151BQ8IW70 566 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 LRRC8AQ8IWT6 810 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 OR4N4Q8N0Y3 316 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 MIEF2Q96C03 454 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 PLCD4Q9BRC7 762 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 CRB3Q9BUF7 120 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 SOX17Q9H6I2 414 aaPredicted RBP16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 ZBTB20Q9HC78 741 aaPredicted RBP16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 COMMD10Q9Y6G5 202 aa16.89■□□□□ 0.29
PTPMT1-201ENST00000326656 ANKUB1A6NFN9 424 aa16.88■□□□□ 0.29
PTPMT1-201ENST00000326656 H0YGG7 62 aa16.88■□□□□ 0.29
PTPMT1-201ENST00000326656 NRDCO43847 1150 aa16.88■□□□□ 0.29
PTPMT1-201ENST00000326656 AVILO75366 819 aa16.88■□□□□ 0.29
PTPMT1-201ENST00000326656 USP1O94782 785 aa16.88■□□□□ 0.29
PTPMT1-201ENST00000326656 EIF2S1P05198 315 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms