RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 ZNF284Q2VY69 593 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 LDLRAP1Q5SW96 308 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 OR4F3Q6IEY1 312 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 DOK6Q6PKX4 331 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 Q6ZVL8 140 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 THOC6Q86W42 341 aaKnown RBP21.69■■□□□ 1.06
PNKP-201ENST00000322344 GLMNQ92990 594 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 CCDC138Q96M89 665 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 OCEL1Q9H607 264 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 FAM120CQ9NX05 1096 aaKnown RBP21.69■■□□□ 1.06
PNKP-201ENST00000322344 VPS29Q9UBQ0 182 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 UTS2RQ9UKP6 389 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 BLOC1S6Q9UL45 172 aa21.69■■□□□ 1.06
PNKP-201ENST00000322344 RUVBL1Q9Y265 456 aaKnown RBP21.69■■□□□ 1.06
PNKP-201ENST00000322344 CROCCQ5TZA2 2017 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 NOL3O60936 208 aaKnown RBP21.68■■□□□ 1.06
PNKP-201ENST00000322344 LEFTY1O75610 366 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 LRATO95237 230 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 MYCLP1P12525 358 aaPredicted RBP21.68■■□□□ 1.06
PNKP-201ENST00000322344 TIMP2P16035 220 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 HNF4AP41235 474 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 GABARAPL2P60520 117 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 CTBSQ01459 385 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 PCDH1Q08174 1060 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 LAPTM5Q13571 262 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 TUBA3CQ13748 450 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 SKIV2LQ15477 1246 aaKnown RBP21.68■■□□□ 1.06
PNKP-201ENST00000322344 SYTL3Q4VX76 610 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 XKR6Q5GH73 641 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 ZC3H12BQ5HYM0 836 aaKnown RBP21.68■■□□□ 1.06
PNKP-201ENST00000322344 CES5AQ6NT32 575 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 ERICH5Q6P6B1 374 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 RAVER1Q8IY67 606 aaKnown RBP21.68■■□□□ 1.06
PNKP-201ENST00000322344 C10orf111Q8N326 155 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 KLHL23Q8NBE8 558 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 WDR20Q8TBZ3 569 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 HCAR2Q8TDS4 363 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 FRS2Q8WU20 508 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 BTN2A2Q8WVV5 523 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 NRBF2Q96F24 287 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 EGLN2Q96KS0 407 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 VPS35Q96QK1 796 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 RIOK2Q9BVS4 552 aaKnown RBP21.68■■□□□ 1.06
PNKP-201ENST00000322344 MAPRE3Q9UPY8 281 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 ORC6Q9Y5N6 252 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 CLGNO14967 610 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 ABCB7O75027 752 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 MYO1DO94832 1006 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 CATP04040 527 aaKnown RBP21.68■■□□□ 1.06
PNKP-201ENST00000322344 PTPN2P17706 415 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 CRHBPP24387 322 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 ETV3P41162 512 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 RAD23AP54725 363 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 IL18R1Q13478 541 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 ARSIQ5FYB1 569 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 GPR107Q5VW38 600 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 DPPA4Q7L190 304 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 TMEM159Q96B96 161 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 TCEAL4Q96EI5 215 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 LRIG1Q96JA1 1093 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 AMBRA1Q9C0C7 1298 aa21.68■■□□□ 1.06
PNKP-201ENST00000322344 REXO4Q9GZR2 422 aaKnown RBP21.68■■□□□ 1.06
PNKP-201ENST00000322344 SPATA6Q9NWH7 488 aaPredicted RBP21.68■■□□□ 1.06
PNKP-201ENST00000322344 ARHGEF33A8MVX0 844 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 H3BMQ9 156 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 FPGTO14772 594 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 NOBOXO60393 691 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 XPAP23025 273 aaPredicted RBP21.67■■□□□ 1.06
PNKP-201ENST00000322344 RPS6KA3P51812 740 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 KCNAB2Q13303 367 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 NEDD8Q15843 81 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 GRHL2Q6ISB3 625 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 RTL10Q7L3V2 364 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 OR8J2Q8NGG1 315 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 OR13F1Q8NGS4 319 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 OTUB2Q96DC9 234 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 MAGED4Q96JG8 741 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 MRGPRX3Q96LB0 322 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 COG8Q96MW5 612 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 PANX1Q96RD7 426 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 MARK1Q9P0L2 795 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 DKK3Q9UBP4 350 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 IRAK3Q9Y616 596 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 TRIM64BA6NI03 449 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 FADS2P1A8MWK0 482 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 H0YIV9 168 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 HS6ST1O60243 411 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 ATG13O75143 517 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 MOSPD3O75425 235 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 EPN2O95208 641 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 UGT8Q16880 541 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 LRRC23Q53EV4 343 aaPredicted RBP21.67■■□□□ 1.06
PNKP-201ENST00000322344 LY6G5CQ5SRR4 150 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 C6orf141Q5SZD1 244 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 SHQ1Q6PI26 577 aaKnown RBP21.67■■□□□ 1.06
PNKP-201ENST00000322344 ARL10Q8N8L6 244 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 ADNPQ9H2P0 1102 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 BRF2Q9HAW0 419 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 AASDHPPTQ9NRN7 309 aa21.67■■□□□ 1.06
PNKP-201ENST00000322344 IL36AQ9UHA7 158 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms