RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 KRT75O95678 551 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 EIF2S1P05198 315 aaKnown RBP15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 SRCP12931 536 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 ACRV1P26436 265 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 MTHFRP42898 656 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 ILF2Q12905 390 aaKnown RBP15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 PRKG2Q13237 762 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 ASTLQ6HA08 431 aaPredicted RBP15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 SERPINA13PQ6UXR4 307 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 Q6ZNB5 142 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 LYSMD2Q8IV50 215 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 FRS2Q8WU20 508 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 FOXJ1Q92949 421 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 ZNF382Q96SR6 550 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 RHNO1Q9BSD3 238 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 NUDT4Q9NZJ9 180 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 SNX5Q9Y5X3 404 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 HCFC2Q9Y5Z7 792 aa15.14■□□□□ 0.01
SHROOM1-201ENST00000319854 LRATO95237 230 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 LHCGRP22888 699 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 ISL1P61371 349 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 COPZ1P61923 177 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 DGCR6Q14129 220 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 CRY1Q16526 586 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 NKG7Q16617 165 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 XKR7Q5GH72 579 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 PLPP4Q5VZY2 271 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 ANKRD46Q86W74 232 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 DTWD1Q8N5C7 304 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 THUMPD3Q9BV44 507 aaKnown RBP15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 ATG10Q9H0Y0 220 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 NEK6Q9HC98 313 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 PRDM8Q9NQV8 689 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 DEAF1O75398 565 aaPredicted RBP15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 PRSS23O95084 383 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 MATN4O95460 622 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 GSNP06396 782 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 ITPKAP23677 461 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 SPAM1P38567 509 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 NTHL1P78549 312 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 ARHGEF6Q15052 776 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 DGUOKQ16854 277 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 FAM174BQ3ZCQ3 159 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 SPATA19Q7Z5L4 167 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 FAM83FQ8NEG4 500 aaPredicted RBP15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 RHOXF1Q8NHV9 184 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 BBS2Q9BXC9 721 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 SLIRPQ9GZT3 109 aaKnown RBP15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 ERVK-18Q9QC07 812 aa15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 ZNF490Q9ULM2 529 aaPredicted RBP15.13■□□□□ 0.01
SHROOM1-201ENST00000319854 TRAV19A0A0A6YYK7 116 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 OR2AG2A6NM03 316 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 HIDE1A8MVS5 230 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 H7C0S8 307 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 DGKAP23743 735 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 CXCR2P25025 360 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 EIF2DP41214 584 aaKnown RBP15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 WDR5P61964 334 aaKnown RBP15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 TMEM199Q8N511 208 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 ING5Q8WYH8 240 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 AURKBQ96GD4 344 aaPredicted RBP15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 ACTR8Q9H981 624 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 LEF1Q9UJU2 399 aaPredicted RBP15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 PCDHB1Q9Y5F3 818 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 MICAL3Q7RTP6 2002 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 NOTOA8MTQ0 251 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 G3V2T6 193 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 TBX1O43435 398 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 KLK8O60259 260 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 OTCP00480 354 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 GNRH1P01148 92 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 CDC20Q12834 499 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 TRAF3Q13114 568 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 TSTA3Q13630 321 aaPredicted RBP15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 STEAP3Q658P3 488 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 PPP2R2DQ66LE6 453 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 LAIR1Q6GTX8 287 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 SULT1C3Q6IMI6 304 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 CERS6Q6ZMG9 384 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 SPATC1Q76KD6 591 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 SPRED2Q7Z698 418 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 NXPE1Q8N323 547 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 ELMOD1Q8N336 334 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 FIG4Q92562 907 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 NSMCE2Q96MF7 247 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 EMILIN2Q9BXX0 1053 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 DSN1Q9H410 356 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 DFNA5O60443 496 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 VPS4BO75351 444 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 DLGAP3O95886 979 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 CDH1P12830 882 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 ACVR2AP27037 513 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 PPP5CP53041 499 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 DDX39BQ13838 428 aaKnown RBP15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 GTDC1Q4AE62 458 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 MPPE1Q53F39 396 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 ENPP6Q6UWR7 440 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 ANKRD33Q7Z3H0 272 aa15.12■□□□□ 0.01
SHROOM1-201ENST00000319854 TMEM179BQ7Z7N9 219 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms