RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 C1orf105O95561 183 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 TNFRSF8P28908 595 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 CXCR5P32302 372 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 VSX2P58304 361 aaPredicted RBP13.58□□□□□ -0.24
RPP40-201ENST00000319533 CDC16Q13042 620 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 AARS2Q5JTZ9 985 aaKnown RBP13.58□□□□□ -0.24
RPP40-201ENST00000319533 FRMPD2BQ6IN97 320 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 PRMT9Q6P2P2 845 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 PPP1R21Q6ZMI0 780 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 SHISA6Q6ZSJ9 500 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 RNF44Q7L0R7 432 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 GSTA5Q7RTV2 222 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 TAX1BP1Q86VP1 789 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 REXO1L1PQ8IX06 675 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 CFAP61Q8NHU2 1237 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 STT3BQ8TCJ2 826 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 MESP1Q9BRJ9 268 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 CRB3Q9BUF7 120 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 P2RY12Q9H244 342 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 ZNF304Q9HCX3 659 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 RAB6BQ9NRW1 208 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 CIDEBQ9UHD4 219 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 MRFAP1Q9Y605 127 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 SVILO95425 2214 aa13.58□□□□□ -0.24
RPP40-201ENST00000319533 APCP25054 2843 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 A0A1B0GUH1 482 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 A0A1W2PPV9 198 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 HNRNPRO43390 633 aaKnown RBP13.57□□□□□ -0.24
RPP40-201ENST00000319533 KIF5CO60282 957 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 ZGLP1P0C6A0 271 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 SOX11P35716 441 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 TTPAP49638 278 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 EMP3P54852 163 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 PRAMEP78395 509 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 KLC1Q07866 573 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 TMED2Q15363 201 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 SIX1Q15475 284 aaPredicted RBP13.57□□□□□ -0.24
RPP40-201ENST00000319533 TTC23LQ6PF05 361 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 C4orf22Q6V702 233 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 KRT222Q8N1A0 295 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 DTWD1Q8N5C7 304 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 CATSPER1Q8NEC5 780 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 OR2L3Q8NG85 312 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 OR2A1Q8NGT9 310 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 PSMF1Q92530 271 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 RELTQ969Z4 430 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 PBKQ96KB5 322 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 PANX3Q96QZ0 392 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 CATSPERZQ9NTU4 200 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 TRMT1Q9NXH9 659 aaKnown RBP13.57□□□□□ -0.24
RPP40-201ENST00000319533 MARCH4Q9P2E8 410 aaPredicted RBP13.57□□□□□ -0.24
RPP40-201ENST00000319533 ZNF282Q9UDV7 671 aaPredicted RBP13.57□□□□□ -0.24
RPP40-201ENST00000319533 DRG1Q9Y295 367 aaKnown RBP13.57□□□□□ -0.24
RPP40-201ENST00000319533 FAM169AQ9Y6X4 670 aa13.57□□□□□ -0.24
RPP40-201ENST00000319533 LOC105369274A0A096LPK9 316 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 LOC102723532A0A0G2JNH3 316 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 OR2A25A4D2G3 310 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 PCDH17O14917 1159 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 KPNA5O15131 536 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 USP1O94782 785 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 APRTP07741 180 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 ETS1P14921 441 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 ACPPP15309 386 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 FDXRP22570 491 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 RPS3P23396 243 aaKnown RBP eCLIP13.56□□□□□ -0.24
RPP40-201ENST00000319533 CCNFP41002 786 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 TDGF1P3P51864 188 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 OCA2Q04671 838 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 PRTGQ2VWP7 1150 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 CCSMST1Q4G0I0 132 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 FBXO42Q6P3S6 717 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 FAM180AQ6UWF9 173 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 LINC00696Q6ZRV3 163 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 LDB1Q86U70 411 aaPredicted RBP13.56□□□□□ -0.24
RPP40-201ENST00000319533 LRRC6Q86X45 466 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 KBTBD2Q8IY47 623 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 OR4N4Q8N0Y3 316 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 MPP5Q8N3R9 675 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 METTL27Q8N6F8 245 aaPredicted RBP13.56□□□□□ -0.24
RPP40-201ENST00000319533 BCORP1Q8N888 145 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 MIEF2Q96C03 454 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 CNDP1Q96KN2 507 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 C10orf90Q96M02 699 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 NAP1L3Q99457 506 aaPredicted RBP13.56□□□□□ -0.24
RPP40-201ENST00000319533 ZNF160Q9HCG1 818 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 IGSF5Q9NSI5 407 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 TREX1Q9NSU2 369 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 OLAHQ9NV23 265 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 SPATA7Q9P0W8 599 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 ANAPC5Q9UJX4 755 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 NFS1Q9Y697 457 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 MAU2Q9Y6X3 613 aa13.56□□□□□ -0.24
RPP40-201ENST00000319533 TEP1Q99973 2627 aaKnown RBP13.55□□□□□ -0.24
RPP40-201ENST00000319533 MAP2K7O14733 419 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 CD3EAPO15446 510 aaKnown RBP13.55□□□□□ -0.24
RPP40-201ENST00000319533 ZG16O60844 167 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 ERGP11308 486 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 COX6A1P12074 109 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 PSMB5P28074 263 aa13.55□□□□□ -0.24
RPP40-201ENST00000319533 BDKRB1P46663 353 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms