RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 POPDC3Q9HBV1 291 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 ABCC13Q9NSE7 274 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 GPRC5BQ9NZH0 403 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 ZNF490Q9ULM2 529 aaPredicted RBP9.4□□□□□ -0.9
PTPRA-202ENST00000318266 GABRQQ9UN88 632 aa9.4□□□□□ -0.9
PTPRA-202ENST00000318266 TBKBP1A7MCY6 615 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 RAMP2O60895 175 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 ALX3O95076 343 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 POMCP01189 267 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 FGF1P05230 155 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 FABP3P05413 133 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 POU2F1P14859 743 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 OR1E1P30953 314 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 MC4RP32245 332 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 ZNF157P51786 506 aaPredicted RBP9.4□□□□□ -0.91
PTPRA-202ENST00000318266 CASP9P55211 416 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 CXCR4P61073 352 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 GPLD1P80108 840 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 ZXDBP98169 803 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 PRKCDQ05655 676 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 TYSND1Q2T9J0 566 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 SMU1Q2TAY7 513 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 CTSL3PQ5NE16 218 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 AFMIDQ63HM1 303 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 TUBA3EQ6PEY2 450 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 MBOAT1Q6ZNC8 495 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 OR10T2Q8NGX3 314 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 EGLN2Q96KS0 407 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 PPP3R2Q96LZ3 170 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 SPON2Q9BUD6 331 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 ZYG11BQ9C0D3 744 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 REEP1Q9H902 201 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 MUTYHQ9UIF7 546 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 DLGAP4Q9Y2H0 992 aa9.4□□□□□ -0.91
PTPRA-202ENST00000318266 DNMT3AQ9Y6K1 912 aaPredicted RBP9.4□□□□□ -0.91
PTPRA-202ENST00000318266 MANSC4A6NHS7 340 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 H3BM21 787 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 ERVH48-1M5A8F1 160 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 ULK1O75385 1050 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 CRYZL1O95825 349 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 ITGB1P05556 798 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 HOXB8P17481 243 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 TNFRSF1BP20333 461 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 TACR1P25103 407 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 DNAJA1P31689 397 aaKnown RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 S100A3P33764 101 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 MRPL19P49406 292 aaKnown RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 UGT2B15P54855 530 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 ELP6Q0PNE2 266 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 SLC46A3Q7Z3Q1 461 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 ZNF438Q7Z4V0 828 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 LPCAT1Q8NF37 534 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 MDGA1Q8NFP4 955 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 GPR150Q8NGU9 434 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 VANGL1Q8TAA9 524 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 ULK4Q96C45 1275 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 MYEOVQ96EZ4 313 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 HSH2DQ96JZ2 352 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 SNX18Q96RF0 628 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 LRTM1Q9HBL6 345 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 SLC6A14Q9UN76 642 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 PCDHGA6Q9Y5G7 932 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 PEX16Q9Y5Y5 336 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 LYVE1Q9Y5Y7 322 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 A0A0D9SEW6 157 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 SMIM30A4D0T7 59 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 GFRA2O00451 464 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 RGS14O43566 566 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 GLUD1P00367 558 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 THP07101 528 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 FHP07954 510 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 ADORA3P0DMS8 318 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 BMP1P13497 986 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 HLA-DPA1P20036 260 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 FPR1P21462 350 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 HTR2BP41595 481 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 GNPDA1P46926 289 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 GPR15P49685 360 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 SMARCB1Q12824 385 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 MS4A13Q5J8X5 152 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 FBXL22Q6P050 247 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 RAB43Q86YS6 212 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 ELMOD2Q8IZ81 293 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 SLC38A6Q8IZM9 456 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 CACTIN-AS1Q8N1I8 211 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 JPH3Q8WXH2 748 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 GGHQ92820 318 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 OR5M11Q96RB7 305 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 CPPED1Q9BRF8 314 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 SLC30A2Q9BRI3 323 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 MROH8Q9H579 483 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 MAGIXQ9H6Y5 334 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 ANKHQ9HCJ1 492 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 IL1RAPQ9NPH3 570 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 AASDHPPTQ9NRN7 309 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 ABI2Q9NYB9 513 aaPredicted RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 PCDHGC4Q9Y5F7 938 aa9.39□□□□□ -0.91
PTPRA-202ENST00000318266 PDCD11Q14690 1871 aaKnown RBP9.39□□□□□ -0.91
PTPRA-202ENST00000318266 MEIOCA2RUB1 952 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms