RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 ZDHHC2Q9UIJ5 367 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 ZNF225Q9UK10 706 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 RP1P56715 2156 aa14.87□□□□□ -0.03
PDLIM5-202ENST00000318007 KDM1AO60341 852 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 PRAMEF4O60810 478 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 STATHP02808 62 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 ERGP11308 486 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 HOXB3P14651 431 aaPredicted RBP14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 GGT5P36269 586 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 GFERP55789 205 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 LCP2Q13094 533 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 CSRP2Q16527 193 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 CPSF6Q16630 551 aaKnown RBP eCLIP14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 XKR6Q5GH73 641 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 PRAMEF9Q5VWM5 478 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 LETMD1Q6P1Q0 360 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 LRRC70Q7Z2Q7 622 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 SYVN1Q86TM6 617 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 C17orf82Q86X59 251 aaPredicted RBP14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 OR4F6Q8NGB9 312 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 UBTD2Q8WUN7 234 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 RAB11FIP5Q9BXF6 653 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 ATXN7L1Q9ULK2 861 aaPredicted RBP14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 TMCO1Q9UM00 188 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 RNF11Q9Y3C5 154 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 DYRK1BQ9Y463 629 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 DCHS1Q96JQ0 3298 aa14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 SNRNP200O75643 2136 aaKnown RBP14.86□□□□□ -0.03
PDLIM5-202ENST00000318007 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 H7BY64 318 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 GIPC1O14908 333 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 NUDT21O43809 227 aaKnown RBP14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 KIF1CO43896 1103 aaKnown RBP14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 SH3BGRLO75368 114 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 SKAP2O75563 359 aaPredicted RBP14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 CRCPO75575 148 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 TGM1P22735 817 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 GRK2P25098 689 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 GRIA3P42263 894 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 ERVPABLB-1P60509 514 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 PRKAA1Q13131 559 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 CHIT1Q13231 466 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 SUZ12Q15022 739 aaKnown RBP14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 ADNP2Q6IQ32 1131 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 SCIMPQ6UWF3 145 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 EFL1Q7Z2Z2 1120 aaKnown RBP14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 OOSP2Q86WS3 158 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 RNF175Q8N4F7 328 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 OR2A1Q8NGT9 310 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 OR6Y1Q8NGX8 325 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 CNDP1Q96KN2 507 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 CNDP2Q96KP4 475 aaKnown RBP14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 PRAP1Q96NZ9 151 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 TGM7Q96PF1 710 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 SGPP1Q9BX95 441 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 IRF2BPLQ9H1B7 796 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 SPNS1Q9H2V7 528 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 DNAAF2Q9NVR5 837 aaKnown RBP14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 ACTR10Q9NZ32 417 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 OR6C2Q9NZP2 312 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 TMEM9Q9P0T7 183 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 PTGDR2Q9Y5Y4 395 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 KCNE2Q9Y6J6 123 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 FEZF1A0PJY2 475 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 OR5K3A6NET4 321 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 PROS1P07225 676 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 UGT2B7P16662 529 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 GRK6P43250 576 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 IRF8Q02556 426 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 NHLH1Q02575 133 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 ARHGAP19Q14CB8 494 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 SGO1Q5FBB7 561 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 KIAA1614Q5VZ46 1190 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 ARMC6Q6NXE6 501 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 TRIM42Q8IWZ5 723 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 ZNF740Q8NDX6 193 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 IFI44Q8TCB0 444 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 AGAP11Q8TF27 550 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 FCRL4Q96PJ5 515 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 CCDC3Q9BQI4 270 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 THAP1Q9NVV9 213 aa14.85□□□□□ -0.03
PDLIM5-202ENST00000318007 ZNF839A8K0R7 811 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 A8MU76 341 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 NPHS1O60500 1241 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 SNNO75324 88 aaPredicted RBP14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 RASSF9O75901 435 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 CD59P13987 128 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 CD22P20273 847 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 MAGP20916 626 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 OCRLQ01968 901 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 TRAF3Q13114 568 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 DDX39BQ13838 428 aaKnown RBP14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 PDCD2Q16342 344 aaPredicted RBP14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 CDKL4Q5MAI5 379 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 ICE2Q659A1 982 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 GPRIN3Q6ZVF9 776 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 MILR1Q7Z6M3 343 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 C17orf64Q86WR6 236 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 NAXDQ8IW45 347 aa14.84□□□□□ -0.03
PDLIM5-202ENST00000318007 OR2L3Q8NG85 312 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms