RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 KRT84Q9NSB2 600 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 TAF4O00268 1085 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 FKBP9O95302 570 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 ATF6P18850 670 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 ITGALP20701 1170 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 TRPC1P48995 793 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 ITGA1P56199 1179 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 FAM189BP81408 668 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 DUSP4Q13115 394 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 CPSF6Q16630 551 aaKnown RBP eCLIP18.57■□□□□ 0.561e-10■□□□□ 11.3
RTN4-201ENST00000317610 INO80DQ53TQ3 878 aaPredicted RBP18.57■□□□□ 0.56
RTN4-201ENST00000317610 LYPLAL1Q5VWZ2 237 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 ERICH5Q6P6B1 374 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 MBOAT1Q6ZNC8 495 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 GPR155Q7Z3F1 870 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 CYP2U1Q7Z449 544 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 LYSMD2Q8IV50 215 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 FAM193BQ96PV7 902 aaPredicted RBP18.57■□□□□ 0.56
RTN4-201ENST00000317610 DCSTAMPQ9H295 470 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 POLE4Q9NR33 117 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 LATS2Q9NRM7 1088 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 ZNF232Q9UNY5 417 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 SAMHD1Q9Y3Z3 626 aaKnown RBP18.57■□□□□ 0.56
RTN4-201ENST00000317610 A3GALT2U3KPV4 340 aa18.57■□□□□ 0.56
RTN4-201ENST00000317610 PABPN1LA6NDY0 278 aaKnown RBP18.56■□□□□ 0.56
RTN4-201ENST00000317610 METTL15A6NJ78 407 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 EVPLLA8MZ36 301 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 hCG_2039718K7EN88 272 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 KCNK5O95279 499 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 PGLSO95336 258 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 BMP1P13497 986 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 MAPK1P28482 360 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 KDELR2P33947 212 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 TGFBR1P36897 503 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 BOP1Q14137 746 aaKnown RBP18.56■□□□□ 0.56
RTN4-201ENST00000317610 MAPK11Q15759 364 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 ZNF181Q2M3W8 571 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 C1QTNF12Q5T7M4 302 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 DEPDC1Q5TB30 811 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 ZNF783Q6ZMS7 281 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 CBLL1Q75N03 491 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 EIF3MQ7L2H7 374 aaKnown RBP18.56■□□□□ 0.56
RTN4-201ENST00000317610 HORMAD1Q86X24 394 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 TTC16Q8NEE8 873 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 SELENOMQ8WWX9 145 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 NELL1Q92832 810 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 ERLEC1Q96DZ1 483 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 MYO19Q96H55 970 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 SLC32A1Q9H598 525 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 SAGE2PA6NJ88 616 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 PCDHGA12O60330 932 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 GPX2P18283 190 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 SERPINB1P30740 379 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 CORO1AP31146 461 aaKnown RBP18.56■□□□□ 0.56
RTN4-201ENST00000317610 RPP38P78345 283 aaKnown RBP18.56■□□□□ 0.56
RTN4-201ENST00000317610 CREMQ03060 361 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 ABRQ12979 859 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 NPRL3Q12980 569 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 ZNF404Q494X3 552 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 ARMC12Q5T9G4 340 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 ZCCHC8Q6NZY4 707 aaKnown RBP18.56■□□□□ 0.56
RTN4-201ENST00000317610 C17orf99Q6UX52 265 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 PSMA8Q8TAA3 256 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 TXNDC15Q96J42 360 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 IL26Q9NPH9 171 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 SIRT5Q9NXA8 310 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 KIF17Q9P2E2 1029 aa18.56■□□□□ 0.56
RTN4-201ENST00000317610 PIKFYVEQ9Y2I7 2098 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 CA12O43570 354 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 ADAMTS4O75173 837 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 STC2O76061 302 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 DIRAS1O95057 198 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 ASGR1P07306 291 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 ANXA5P08758 320 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 FPGSQ05932 587 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 ARHGEF7Q14155 803 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 DUOXA1Q1HG43 343 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 IQCCQ4KMZ1 466 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 AHSA2Q719I0 299 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 C16orf59Q7L2K0 433 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 VTCN1Q7Z7D3 282 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 PTOV1Q86YD1 416 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 ENTHD1Q8IYW4 607 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 C2orf15Q8WU43 125 aaKnown RBP18.55■□□□□ 0.56
RTN4-201ENST00000317610 MYOCQ99972 504 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 HTATIP2Q9BUP3 242 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 GABARAPL3Q9BY60 117 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 SLCO3A1Q9UIG8 710 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 ZNF229Q9UJW7 825 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 SNX6Q9UNH7 406 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 CLIC1O00299 241 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 LIPAP38571 399 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 RHOAP61586 193 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 ADGRF1Q5T601 910 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 OR4F3Q6IEY1 312 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 LRRC70Q7Z2Q7 622 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 ATG16L2Q8NAA4 619 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 UBE2FQ969M7 185 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 HSH2DQ96JZ2 352 aa18.55■□□□□ 0.56
RTN4-201ENST00000317610 HRASLS5Q96KN8 279 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms