RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 IDO2Q6ZQW0 420 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 GALNT5Q7Z7M9 940 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 CYP4Z2PQ8N1L4 340 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 TCAIMQ8N3R3 496 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 C11orf65Q8NCR3 313 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 NETO1Q8TDF5 533 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 ERLEC1Q96DZ1 483 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 ADGRE3Q9BY15 652 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 CARS2Q9HA77 564 aaKnown RBP4.65□□□□□ -1.67
PTPN13-201ENST00000316707 SNX6Q9UNH7 406 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 DHRS7Q9Y394 339 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 ARVCFO00192 962 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 SRPRAP08240 638 aaKnown RBP4.65□□□□□ -1.67
PTPN13-201ENST00000316707 MZF1P28698 734 aaPredicted RBP4.65□□□□□ -1.67
PTPN13-201ENST00000316707 MRPL28Q13084 256 aaKnown RBP4.65□□□□□ -1.67
PTPN13-201ENST00000316707 EIF4EBP2Q13542 120 aaPredicted RBP4.65□□□□□ -1.67
PTPN13-201ENST00000316707 GBX1Q14549 363 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 IRF3Q14653 427 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 PDZK1Q5T2W1 519 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 DDI2Q5TDH0 399 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF438Q7Z4V0 828 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 GOLGA7Q7Z5G4 137 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 BPHLQ86WA6 291 aaPredicted RBP4.65□□□□□ -1.67
PTPN13-201ENST00000316707 SULF1Q8IWU6 871 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 CELF2-AS1Q8N7Q2 184 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 OR4K2Q8NGD2 314 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 OR52B6Q8NGF0 335 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 MYLPFQ96A32 169 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 PSKH2Q96QS6 385 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 ARPC5LQ9BPX5 153 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 ANKRA2Q9H9E1 313 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 NEU3Q9UQ49 428 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 PADI2Q9Y2J8 665 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 IPPQ9Y573 584 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 GJA3Q9Y6H8 435 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 MAU2Q9Y6X3 613 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 A0A1B0GTL3 188 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 NT5C1B-RDH14C9J2C7 533 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 TNFRSF11BO00300 401 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 CTDSP2O14595 271 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 ENPP3O14638 875 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 FFAR2O15552 330 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 SEMA3DO95025 777 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 ITGALP20701 1170 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 C4BPBP20851 252 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 C21orf33P30042 268 aaPredicted RBP4.65□□□□□ -1.67
PTPN13-201ENST00000316707 HLA-FP30511 346 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF140P52738 457 aaPredicted RBP4.65□□□□□ -1.67
PTPN13-201ENST00000316707 YBX1P67809 324 aaKnown RBP4.65□□□□□ -1.67
PTPN13-201ENST00000316707 GALK2Q01415 458 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 SMN1Q16637 294 aaKnown RBP4.65□□□□□ -1.67
PTPN13-201ENST00000316707 IQCCQ4KMZ1 466 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 SNAP47Q5SQN1 464 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 RNLSQ5VYX0 342 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 GPR153Q6NV75 609 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 DPY19L3Q6ZPD9 716 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 BHLHA9Q7RTU4 235 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 VN1R5Q7Z5H4 357 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 ZNF467Q7Z7K2 595 aaPredicted RBP4.65□□□□□ -1.67
PTPN13-201ENST00000316707 CPA6Q8N4T0 437 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 OR13C4Q8NGS5 318 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 ARHGAP39Q9C0H5 1083 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 SLC25A37Q9NYZ2 338 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 KLK14Q9P0G3 267 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 SLCO3A1Q9UIG8 710 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 SSR3Q9UNL2 185 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 ITM2BQ9Y287 266 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 MED16Q9Y2X0 877 aa4.65□□□□□ -1.67
PTPN13-201ENST00000316707 RPL36Q9Y3U8 105 aaKnown RBP4.65□□□□□ -1.67
PTPN13-201ENST00000316707 RBBP6Q7Z6E9 1792 aaKnown RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 IRGMA1A4Y4 181 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ZSCAN5BA6NJL1 495 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 H7C0S8 307 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 M0R082 166 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 C1QBP02746 253 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ANXA5P08758 320 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ADORA3P0DMS8 318 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CFL1P23528 166 aaKnown RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 GZMMP51124 257 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CRYBB1P53674 252 aaPredicted RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CREMQ03060 361 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 PPP1R8Q12972 351 aaKnown RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 LCN1P1Q5VSP4 162 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CEP68Q76N32 757 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 GPRIN1Q7Z2K8 1008 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 TMEM179BQ7Z7N9 219 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 LIX1Q8N485 282 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 CD200R1Q8TD46 325 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 DNAJA4Q8WW22 397 aaPredicted RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 FUBP3Q96I24 572 aaKnown RBP eCLIP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 RPRD1AQ96P16 312 aaPredicted RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ASPNQ9BXN1 380 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ALOXE3Q9BYJ1 711 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ROGDIQ9GZN7 287 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 QTRT2Q9H974 415 aaKnown RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 RDH14Q9HBH5 336 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 ING4Q9UNL4 249 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SCAF8Q9UPN6 1271 aaKnown RBP4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SCN4AP35499 1836 aa4.64□□□□□ -1.67
PTPN13-201ENST00000316707 SBF2Q86WG5 1849 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms