RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 KRTCAP2Q8N6L1 136 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 ARIH2OSQ8N7S6 290 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 OR56A3Q8NH54 315 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 ZFP90Q8TF47 636 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 STMN2Q93045 179 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 CDK15Q96Q40 435 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 ZNF347Q96SE7 839 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 SEMA3CQ99985 751 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 CDCA4Q9BXL8 241 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 IL20RAQ9UHF4 553 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 PSORS1C1Q9UIG5 152 aa7.59□□□□□ -1.2
CNOT4-201ENST00000315544 FNDC3AQ9Y2H6 1198 aaKnown RBP7.59□□□□□ -1.2
CNOT4-201ENST00000315544 SMG1Q96Q15 3661 aaKnown RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 SLC5A10A0PJK1 596 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 PRMT5O14744 637 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 ACSL4O60488 711 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 SC5DO75845 299 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 CLPXO76031 633 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 FGF18O76093 207 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 ZIC2O95409 532 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 HNRNPA1P09651 372 aaKnown RBP eCLIP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 ZNF182P17025 639 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 PTGR1Q14914 329 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 MAD2L1BPQ15013 274 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 HIST2H2ACQ16777 129 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 C2orf27AQ580R0 203 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 ADNP2Q6IQ32 1131 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 ADIPOR2Q86V24 386 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 PHF21BQ96EK2 531 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 RMND5BQ96G75 393 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 EML4Q9HC35 981 aaKnown RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 GPRC5BQ9NZH0 403 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 EIF2B4Q9UI10 523 aaKnown RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 PDE10AQ9Y233 779 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 TIMM22Q9Y584 194 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 CFAP47Q6ZTR5 3102 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 C2orf78A6NCI8 922 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 OR6C75A6NL08 312 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 K7EPI3 171 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 AQP9O43315 295 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 XPOTO43592 962 aaKnown RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 SEMA3DO95025 777 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 MSL3P1P0C860 447 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 BCKDHAP12694 445 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 ACADLP28330 430 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 LIPAP38571 399 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 MAP3K8P41279 467 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 PCBP4P57723 403 aaKnown RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 SLC7A9P82251 487 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 SMARCB1Q12824 385 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 DCTN2Q13561 401 aaKnown RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 ENPP2Q13822 863 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 Q5BKY6 102 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 SDHAF4Q5VUM1 108 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 CYP2R1Q6VVX0 501 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 Q7L0L9 218 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 CROCCP3Q8IVE0 287 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 DDIASQ8IXT1 998 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 RGL4Q8IZJ4 473 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 ADGRG2Q8IZP9 1017 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 SIX6OS1Q8N1H7 587 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 KLHL23Q8NBE8 558 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 POGLUT1Q8NBL1 392 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 OR4D11Q8NGI4 311 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 DNAJB8Q8NHS0 232 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 MAFAQ8NHW3 353 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 FLVCR1-AS1Q8TAF5 88 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 RILPQ96NA2 401 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 WDFY2Q96P53 400 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 VPS35Q96QK1 796 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 IER2Q9BTL4 223 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 POLR1EQ9GZS1 481 aaKnown RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 PRMT8Q9NR22 394 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 SIRT3Q9NTG7 399 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 NDUFAF4Q9P032 175 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 EGFL7Q9UHF1 273 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 ATP6V1HQ9UI12 483 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 MSRAQ9UJ68 235 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 PSME2Q9UL46 239 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 NPIPB15A6NHN6 443 aaPredicted RBP7.58□□□□□ -1.2
CNOT4-201ENST00000315544 ARHGAP33O14559 1287 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 PRKD3O94806 890 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 CISD3P0C7P0 127 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 HOXA6P31267 233 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 KRT20P35900 424 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 MTA1Q13330 715 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 EML3Q32P44 896 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 ARL13BQ3SXY8 428 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 LDLRAP1Q5SW96 308 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 MARC1Q5VT66 337 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 NIPAL1Q6NVV3 410 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 IYDQ6PHW0 289 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 RFLNAQ6ZTI6 216 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 ADGRF3Q8IZF5 1079 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 IL17RDQ8NFM7 739 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 RHOXF1Q8NHV9 184 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 STAG3L4Q8TBR4 150 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 AGR3Q8TD06 166 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 UBE2FQ969M7 185 aa7.58□□□□□ -1.2
CNOT4-201ENST00000315544 KCNJ15Q99712 375 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms