RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 TRAF7Q6Q0C0 670 aa14.29□□□□□ -0.12
COL6A2-202ENST00000310645 ZNF621Q6ZSS3 439 aa14.29□□□□□ -0.12
COL6A2-202ENST00000310645 SLC46A3Q7Z3Q1 461 aa14.29□□□□□ -0.12
COL6A2-202ENST00000310645 CITED4Q96RK1 184 aa14.29□□□□□ -0.12
COL6A2-202ENST00000310645 TMEM45AQ9NWC5 275 aa14.29□□□□□ -0.12
COL6A2-202ENST00000310645 ELOVL2Q9NXB9 296 aa14.29□□□□□ -0.12
COL6A2-202ENST00000310645 WASH4PA8MWX3 477 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 CENPBD1B2RD01 187 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 KIAA0513O60268 411 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 CPSF4O95639 269 aaKnown RBP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 GLUD1P00367 558 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 TTPAP49638 278 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 PCBP1Q15365 356 aaKnown RBP eCLIP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 MED22Q15528 200 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 SLX4IPQ5VYV7 408 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 ZNF517Q6ZMY9 492 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 BEND7Q8N7W2 519 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 GGHQ92820 318 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 TRNT1Q96Q11 434 aaKnown RBP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 PNMA8CA0A1B0GUJ8 204 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 FZD9O00144 591 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 ERN1O75460 977 aaKnown RBP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 CCNDBP1O95273 360 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 BMP1P13497 986 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 LPOP22079 712 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 SOX6P35712 828 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 CRYBB1P53674 252 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 RPS14P62263 151 aaKnown RBP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 MAD2L1Q13257 205 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 ZNF648Q5T619 568 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 PTRHD1Q6GMV3 140 aaKnown RBP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 GLB1L3Q8NCI6 653 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 C1orf74Q96LT6 269 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 PHOX2BQ99453 314 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 DKK3Q9UBP4 350 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 AFF4Q9UHB7 1163 aaKnown RBP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 TLR6Q9Y2C9 796 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 PCDHGA6Q9Y5G7 932 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 ABCB1P08183 1280 aaPredicted RBP14.28□□□□□ -0.12
COL6A2-202ENST00000310645 GRK4P32298 578 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 DGKEP52429 567 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 UGT2B15P54855 530 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 UPP1Q16831 310 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 NEK5Q6P3R8 708 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 CALHM3Q86XJ0 350 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 UBQLNLQ8IYU4 475 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 CLDN19Q8N6F1 224 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 PAF1Q8N7H5 531 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 GPRC5AQ8NFJ5 357 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 MYDGFQ969H8 173 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 TADA1Q96BN2 335 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 KATNBL1Q9H079 304 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 IRF2BPLQ9H1B7 796 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 MMP28Q9H239 520 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 ST3GAL5Q9UNP4 418 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 LYVE1Q9Y5Y7 322 aa14.28□□□□□ -0.12
COL6A2-202ENST00000310645 WDR90Q96KV7 1748 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 EIF3FO00303 357 aaPredicted RBP14.27□□□□□ -0.12
COL6A2-202ENST00000310645 ABHD18Q0P651 414 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 ARHGEF7Q14155 803 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 CDK10Q15131 360 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 ZMAT1Q5H9K5 638 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 C10orf120Q5SQS8 335 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 SBSNQ6UWP8 590 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 CADM2Q8N3J6 435 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 KLHDC9Q8NEP7 349 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 PEX13Q92968 403 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 TSPAN18Q96SJ8 248 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 CINPQ9BW66 212 aaPredicted RBP14.27□□□□□ -0.12
COL6A2-202ENST00000310645 CIPCQ9C0C6 399 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 SERHLQ9NQF3 203 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 MKLN1Q9UL63 735 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 ERVW-1Q9UQF0 538 aa14.27□□□□□ -0.12
COL6A2-202ENST00000310645 MBLAC1A4D2B0 266 aaPredicted RBP14.27□□□□□ -0.13
COL6A2-202ENST00000310645 TBKBP1A7MCY6 615 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 SLC28A1O00337 649 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 CXCL11O14625 94 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 GZMMP51124 257 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 ST3GAL4Q11206 333 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 PCBP2Q15366 365 aaKnown RBP eCLIP14.27□□□□□ -0.13
COL6A2-202ENST00000310645 USP39Q53GS9 565 aaKnown RBP14.27□□□□□ -0.13
COL6A2-202ENST00000310645 THEM5Q8N1Q8 247 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 FCGR1BQ92637 280 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 SNX18Q96RF0 628 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 TIGARQ9NQ88 270 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 TRPV5Q9NQA5 729 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 RPRD1BQ9NQG5 326 aaKnown RBP14.27□□□□□ -0.13
COL6A2-202ENST00000310645 ARIH1Q9Y4X5 557 aaPredicted RBP14.27□□□□□ -0.13
COL6A2-202ENST00000310645 TNFRSF10BO14763 440 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 TAPBPO15533 448 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 PRAMEF11O60813 436 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 EPOP01588 193 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 POU2F1P14859 743 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 MAGEA2P43356 314 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 CASP9P55211 416 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 ZXDBP98169 803 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 SLAMF1Q13291 335 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 INO80DQ53TQ3 878 aaPredicted RBP14.27□□□□□ -0.13
COL6A2-202ENST00000310645 RFPL4BQ6ZWI9 263 aa14.27□□□□□ -0.13
COL6A2-202ENST00000310645 ADAMTSL2Q86TH1 951 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms