RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 FAM76BQ5HYJ3 339 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 SORCS3Q9UPU3 1222 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 ERVK-11Q9UQG0 969 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 OR6C74A6NCV1 312 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 ZNF182P17025 639 aaPredicted RBP12.36□□□□□ -0.43
USP38-201ENST00000307017 MBOAT1Q6ZNC8 495 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 GALNT13Q8IUC8 556 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 FIBCD1Q8N539 461 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 LCN9Q8WX39 176 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 FAM210AQ96ND0 272 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 GTPBP2Q9BX10 602 aaKnown RBP12.36□□□□□ -0.43
USP38-201ENST00000307017 APOBEC3GQ9HC16 384 aaKnown RBP12.36□□□□□ -0.43
USP38-201ENST00000307017 CCDC177Q9NQR7 707 aaPredicted RBP12.36□□□□□ -0.43
USP38-201ENST00000307017 GKN1Q9NS71 199 aa12.36□□□□□ -0.43
USP38-201ENST00000307017 SMCO3A2RU48 225 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 RPL35P42766 123 aaKnown RBP12.35□□□□□ -0.43
USP38-201ENST00000307017 RPP38P78345 283 aaKnown RBP12.35□□□□□ -0.43
USP38-201ENST00000307017 BNC1Q01954 994 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 PAQR3Q6TCH7 311 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 TMEM139Q8IV31 216 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 TOMM5Q8N4H5 51 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 HDDC3Q8N4P3 179 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 SLC22A14Q9Y267 594 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 HSPB11Q9Y547 144 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 A0A0A6YYH2 397 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 A6NJ64 397 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 BBIP1A8MTZ0 92 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 J3KR12 359 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 ARPC2O15144 300 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 PEX14O75381 377 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 H6PDO95479 791 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 PTX3P26022 381 aaPredicted RBP12.35□□□□□ -0.43
USP38-201ENST00000307017 AXLP30530 894 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 INTS6LQ5JSJ4 861 aaKnown RBP12.35□□□□□ -0.43
USP38-201ENST00000307017 IRF2BP1Q8IU81 584 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 TMEM151AQ8N4L1 468 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 ACMSDQ8TDX5 336 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 MRPS30Q9NP92 439 aaKnown RBP12.35□□□□□ -0.43
USP38-201ENST00000307017 ERVK-18Q9QC07 812 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 PITPNM1O00562 1244 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 GRM6O15303 877 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 TLX2O43763 284 aaPredicted RBP12.35□□□□□ -0.43
USP38-201ENST00000307017 GRK6P43250 576 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 PSMA6P60900 246 aaKnown RBP12.35□□□□□ -0.43
USP38-201ENST00000307017 OLR1P78380 273 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 MAPK14Q16539 360 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 DACT2Q5SW24 774 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 VITQ6UXI7 678 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 TOP6BLQ8N6T0 577 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 FTHL17Q9BXU8 183 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 MRPL9Q9BYD2 267 aaKnown RBP12.35□□□□□ -0.43
USP38-201ENST00000307017 DUS2Q9NX74 493 aaKnown RBP12.35□□□□□ -0.43
USP38-201ENST00000307017 FZD10Q9ULW2 581 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 MYH3P11055 1940 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 ATP6V0D1P61421 351 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 ILF3Q12906 894 aaKnown RBP eCLIP12.35□□□□□ -0.43
USP38-201ENST00000307017 TDGQ13569 410 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 GALNT7Q86SF2 657 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 GPR135Q8IZ08 494 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 BEND7Q8N7W2 519 aaPredicted RBP12.35□□□□□ -0.43
USP38-201ENST00000307017 C17orf50Q8WW18 174 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 MICU1Q9BPX6 476 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 TPT1P8Q9HAU6 139 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 B4GALT2O60909 372 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 HCKP08631 526 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 ACP5P13686 325 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 ELAVL2Q12926 359 aaKnown RBP12.35□□□□□ -0.43
USP38-201ENST00000307017 IQCCQ4KMZ1 466 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 SRMSQ9H3Y6 488 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 PCDHGC3Q9UN70 934 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 A0A1W2PPL8 197 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 TLR4O00206 839 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 PCDH7O60245 1069 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 AP2A1O95782 977 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 MMP3P08254 477 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 ZXDBP98169 803 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 SGCBQ16585 318 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 RABL3Q5HYI8 236 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 NKAPLQ5M9Q1 402 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 SYPL2Q5VXT5 272 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 FOXR2Q6PJQ5 311 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 EGFL6Q8IUX8 553 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 SLC38A4Q969I6 547 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 RBM18Q96H35 190 aaKnown RBP12.35□□□□□ -0.43
USP38-201ENST00000307017 KAT8Q9H7Z6 458 aaKnown RBP12.35□□□□□ -0.43
USP38-201ENST00000307017 MED11Q9P086 117 aa12.35□□□□□ -0.43
USP38-201ENST00000307017 NKRFO15226 690 aaKnown RBP eCLIP12.34□□□□□ -0.43
USP38-201ENST00000307017 INSIG1O15503 277 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 CFAP77Q6ZQR2 320 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 TMEM145Q8NBT3 493 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 SPPL2BQ8TCT7 592 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 UNC93B1Q9H1C4 597 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 MIOSQ9NXC5 875 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 ZNF510Q9Y2H8 683 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 PRMT5O14744 637 aaPredicted RBP12.34□□□□□ -0.43
USP38-201ENST00000307017 CYP11A1P05108 521 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 TSHRP16473 764 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 PSEN1P49768 467 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 NKX2-3Q8TAU0 364 aa12.34□□□□□ -0.43
USP38-201ENST00000307017 METTL21AQ8WXB1 218 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms