RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 OR2A1Q8NGT9 310 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 STAG3L4Q8TBR4 150 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 KIAA1191Q96A73 305 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ZNF501Q96CX3 271 aaPredicted RBP10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CABS1Q96KC9 395 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 FCRL4Q96PJ5 515 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 HAUS8Q9BT25 410 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 DPH1Q9BZG8 443 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CHRNA10Q9GZZ6 450 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 WWOXQ9NZC7 414 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SERTAD3Q9UJW9 196 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 IKZF3Q9UKT9 509 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PLCL2Q9UPR0 1127 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 KLHL20Q9Y2M5 609 aa10.58□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NCF1BA6NI72 391 aaPredicted RBP10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SYCE1LA8MT33 242 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NCF1CA8MVU1 366 aaPredicted RBP10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SUPT3HB4E1H0 165 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 KLK10O43240 276 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 RAD1O60671 282 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CPNE3O75131 537 aaKnown RBP10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SUPT3HO75486 399 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SCRG1O75711 98 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 OR2B3O76000 313 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ALDOAP04075 364 aaKnown RBP10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CAPNS1P04632 268 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NCF1P14598 390 aaPredicted RBP10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TFEBP19484 476 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 HRH2P25021 359 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 EIF2S3P41091 472 aaKnown RBP10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 GRIA3P42263 894 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 IRF9Q00978 393 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PRDX1Q06830 199 aaKnown RBP10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 IFFO1Q0D2I5 559 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ZIC1Q15915 447 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TSNAXIP1Q2TAA8 658 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ADGRD1Q6QNK2 874 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 LCTLQ6UWM7 567 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ZFAND4Q86XD8 727 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NLGN4XQ8N0W4 816 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ESX1Q8N693 406 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 IL22RA1Q8N6P7 574 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TTC29Q8NA56 475 aaPredicted RBP10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NLGN4YQ8NFZ3 816 aaPredicted RBP10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 KCTD4Q8WVF5 259 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CLIP3Q96DZ5 547 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SCYL1Q96KG9 808 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 UBXN10Q96LJ8 280 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SELENOSQ9BQE4 189 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 DPH7Q9BTV6 452 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 DHRS4Q9BTZ2 278 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PARD6BQ9BYG5 372 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ALG9Q9H6U8 611 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CNOT10Q9H9A5 744 aaKnown RBP10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 FAM60AQ9NP50 221 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 NUDT4Q9NZJ9 180 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CD274Q9NZQ7 290 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 DYRK1BQ9Y463 629 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ACACAQ13085 2346 aa10.57□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CCDC189A1A4V9 331 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 HMX2A2RU54 273 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SMIM23A6NLE4 172 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ZSCAN9O15535 394 aaPredicted RBP10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 KERAO60938 352 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 IPO13O94829 963 aaKnown RBP10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 WDR47O94967 919 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 KLHL2O95198 593 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 HBQ1P09105 142 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CCNYL3P0C7X3 344 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 GRK3P35626 688 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 HSD17B3P37058 310 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 GLRBP48167 497 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CLN3Q13286 438 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 MAP7Q14244 749 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ACAP2Q15057 778 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 OR4D1Q15615 310 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TCTE1Q5JU00 501 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CDKL4Q5MAI5 379 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 MANEAQ5SRI9 462 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 FCRL6Q6DN72 434 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 SULT1C3Q6IMI6 304 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PWWP2BQ6NUJ5 590 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TLDC1Q6P9B6 456 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 C6orf15Q6UXA7 325 aaPredicted RBP10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 RNF44Q7L0R7 432 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 LRRC56Q8IYG6 542 aaPredicted RBP10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CACNA2D3Q8IZS8 1091 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CENPLQ8N0S6 344 aaPredicted RBP10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 DNAJC22Q8N4W6 341 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 TBC1D19Q8N5T2 526 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 OR56A3Q8NH54 315 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 OR1L3Q8NH93 324 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 AENQ8WTP8 325 aaKnown RBP10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 CAVIN3Q969G5 261 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 ISL2Q96A47 359 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 RERGQ96A58 199 aaPredicted RBP10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 KIAA1143Q96AT1 154 aaPredicted RBP10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PTERQ96BW5 349 aa10.56□□□□□ -0.72
CSPG4P1Y-201ENST00000306641 PYCR2Q96C36 320 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms