RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RPL26L1Q9UNX3 145 aaKnown RBP13.11□□□□□ -0.31
TRIM56-201ENST00000306085 CREMQ03060 361 aa13.11□□□□□ -0.31
TRIM56-201ENST00000306085 DAGLBQ8NCG7 672 aa13.11□□□□□ -0.31
TRIM56-201ENST00000306085 ELP5Q8TE02 316 aa13.11□□□□□ -0.31
TRIM56-201ENST00000306085 ADAM2Q99965 735 aa13.11□□□□□ -0.31
TRIM56-201ENST00000306085 ZNF670Q9BS34 389 aa13.11□□□□□ -0.31
TRIM56-201ENST00000306085 SYT4Q9H2B2 425 aa13.11□□□□□ -0.31
TRIM56-201ENST00000306085 CSF2P04141 144 aa13.11□□□□□ -0.31
TRIM56-201ENST00000306085 SLC30A8Q8IWU4 369 aa13.11□□□□□ -0.31
TRIM56-201ENST00000306085 OR4K2Q8NGD2 314 aa13.11□□□□□ -0.31
TRIM56-201ENST00000306085 PPA2Q9H2U2 334 aa13.11□□□□□ -0.31
TRIM56-201ENST00000306085 CD93Q9NPY3 652 aa13.11□□□□□ -0.31
TRIM56-201ENST00000306085 HCN2Q9UL51 889 aa13.11□□□□□ -0.31
TRIM56-201ENST00000306085 CAPN3P20807 821 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 MPP1Q00013 466 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 ADGRE1Q14246 886 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 SYT16Q17RD7 645 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 USB1Q9BQ65 265 aaKnown RBP13.1□□□□□ -0.31
TRIM56-201ENST00000306085 IPPKQ9H8X2 491 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 EFCAB6Q5THR3 1501 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 SCDO00767 359 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 SEC13P55735 322 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 KLF10Q13118 480 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 NFIXQ14938 502 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 PCBP2Q15366 365 aaKnown RBP eCLIP13.1□□□□□ -0.312e-11■■■■■ 39.5
TRIM56-201ENST00000306085 NTRK2Q16620 822 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 WDSUB1Q8N9V3 476 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 HSPBAP1Q96EW2 488 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 ZBTB45Q96K62 511 aaPredicted RBP13.1□□□□□ -0.31
TRIM56-201ENST00000306085 PSKH2Q96QS6 385 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 ENAMQ9NRM1 1142 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 KBTBD4Q9NVX7 518 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 B3GALT1Q9Y5Z6 326 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 OC90Q02509 493 aaPredicted RBP13.1□□□□□ -0.31
TRIM56-201ENST00000306085 GLYATL2Q8WU03 294 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 ZBED6CLQ96FA7 236 aaPredicted RBP13.1□□□□□ -0.31
TRIM56-201ENST00000306085 ACSS3Q9H6R3 686 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 PLEKHM1Q9Y4G2 1056 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 ATP5A1P25705 553 aaKnown RBP13.1□□□□□ -0.31
TRIM56-201ENST00000306085 MAPK3P27361 379 aaPredicted RBP13.1□□□□□ -0.31
TRIM56-201ENST00000306085 HSPA7P48741 367 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 TUSC3Q13454 348 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 MOB2Q70IA6 237 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 TMPRSS7Q7RTY8 843 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 ALPK1Q96QP1 1244 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 TMEM100Q9NV29 134 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 REV1Q9UBZ9 1251 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 HMX3A6NHT5 357 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 KHNYNO15037 678 aaKnown RBP13.1□□□□□ -0.31
TRIM56-201ENST00000306085 CH25HO95992 272 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 HRGP04196 525 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 TROAPQ12815 778 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 ZNF808Q8N4W9 903 aaPredicted RBP13.1□□□□□ -0.31
TRIM56-201ENST00000306085 NCSTNQ92542 709 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 TRMOQ9BU70 441 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 ZNF670-ZNF695F2Z2N8 137 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 INPPL1O15357 1258 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 TLL1O43897 1013 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 CTDNEP1O95476 244 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 SPATA31D3P0C874 917 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 PER3P56645 1201 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 PGM2L1Q6PCE3 622 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 NCEH1Q6PIU2 408 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 SPATA31D4Q6ZUB0 917 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 HID1Q8IV36 788 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 KCNN1Q92952 543 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 AGAP2Q99490 1192 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 KLRF1Q9NZS2 232 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 ADCY10Q96PN6 1610 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 PLGLAQ15195 96 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 REPS2Q8NFH8 660 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 SERINC1Q9NRX5 453 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 A0A1B0GVM2 712 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 ADH7P40394 386 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 TLE1Q04724 770 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 METTL25Q8N6Q8 603 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 PTPRJQ12913 1337 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 KIAA0556O60303 1618 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 MPPED1O15442 326 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 ZNF460Q14592 562 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 ZNF584Q8IVC4 421 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 CNTD1Q8N815 330 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 ART4Q93070 314 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 MGAT4CQ9UBM8 478 aa13.1□□□□□ -0.31
TRIM56-201ENST00000306085 LRRN3E7EW58 273 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 TLR4O00206 839 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 BACE1P56817 501 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 RPS3AP61247 264 aaKnown RBP13.09□□□□□ -0.31
TRIM56-201ENST00000306085 SCARB2Q14108 478 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 PLEKHN1Q494U1 663 aaPredicted RBP13.09□□□□□ -0.31
TRIM56-201ENST00000306085 LRRN3Q9H3W5 708 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 ZFYVE16Q7Z3T8 1539 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 A8MUA0 341 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 HTR1AP08908 422 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 HTR2BP41595 481 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 HCAR3P49019 387 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 NPTX1Q15818 432 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 PDE12Q6L8Q7 609 aaKnown RBP13.09□□□□□ -0.31
TRIM56-201ENST00000306085 C12orf40Q86WS4 652 aa13.09□□□□□ -0.31
TRIM56-201ENST00000306085 POT1Q9NUX5 634 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms