RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 MRPL42Q9Y6G3 142 aaKnown RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 CCDC154A6NI56 674 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 TNFRSF10AO00220 468 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 SLC16A5O15375 505 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 ACSL4O60488 711 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 RAMP2O60895 175 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 RB1P06400 928 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 MSL3P1P0C860 447 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 CKBP12277 381 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 ATF6P18850 670 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 CD52P31358 61 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 HMGCLP35914 325 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 SGSHP51688 502 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 HUNKP57058 714 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 ESRRGP62508 458 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 EPS8Q12929 822 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 PPP1R8Q12972 351 aaKnown RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 TOP3AQ13472 1001 aaPredicted RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 NPTX1Q15818 432 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 PROX2Q3B8N5 592 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 GRAMD4Q6IC98 578 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 SERPINA11Q86U17 422 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 METTL3Q86U44 580 aaKnown RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 TSPYL5Q86VY4 417 aaPredicted RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 PHACTR4Q8IZ21 702 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 CPXM2Q8N436 756 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 PCSK9Q8NBP7 692 aaKnown RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 OR4F6Q8NGB9 312 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 GPR152Q8TDT2 470 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 GGHQ92820 318 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 SDCCAG3Q96C92 435 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 SLC47A1Q96FL8 570 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 RNF145Q96MT1 663 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 NEDD4LQ96PU5 975 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 FAM193BQ96PV7 902 aaPredicted RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 SEPHS2Q99611 448 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 CENPOQ9BU64 300 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 SEMA4BQ9NPR2 832 aaPredicted RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 FTSJ1Q9UET6 329 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 DAPK2Q9UIK4 370 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 BAG5Q9UL15 447 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 TMPRSS11EQ9UL52 423 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 CASTOR2A6NHX0 329 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 G3V3Q6 166 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 TRIM77I1YAP6 450 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 MAN1A2O60476 641 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 SOCS5O75159 536 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 PCNAP12004 261 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 CD22P20273 847 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 SAT1P21673 171 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 FMO3P31513 532 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 IRS1P35568 1242 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 ACVRL1P37023 503 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 ELAVL2Q12926 359 aaKnown RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 DUSP7Q16829 419 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 PTCHD3Q3KNS1 767 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 AASDHQ4L235 1098 aaPredicted RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.29□□□□□ -1.56
VPS50-202ENST00000305866 AGAP6Q5VW22 663 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 KDELC2Q7Z4H8 507 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 DDX53Q86TM3 631 aaKnown RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 ZNF280BQ86YH2 543 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 RDH10Q8IZV5 341 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 L3MBTL4Q8NA19 623 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 OR4K2Q8NGD2 314 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 MCOLN3Q8TDD5 553 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 ADAMTS19Q8TE59 1207 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 PXYLP1Q8TE99 480 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 PIH1D2Q8WWB5 315 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 PYURFQ96I23 114 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 PPM1MQ96MI6 270 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 AGAP4Q96P64 663 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 SNX18Q96RF0 628 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 NELL2Q99435 816 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 TRAF4Q9BUZ4 470 aaPredicted RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 ACPTQ9BZG2 426 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 EIF2B4Q9UI10 523 aaKnown RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 MUTYHQ9UIF7 546 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 SF3B6Q9Y3B4 125 aaKnown RBP5.29□□□□□ -1.56
VPS50-202ENST00000305866 FIS1Q9Y3D6 152 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 PRSS21Q9Y6M0 314 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 MAU2Q9Y6X3 613 aa5.29□□□□□ -1.56
VPS50-202ENST00000305866 A0A096LPI6 279 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 H7C4K7 107 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 CXCR6O00574 342 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 CTDSP2O14595 271 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 WNT9AO14904 365 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 SGTAO43765 313 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 UGDHO60701 494 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 B3GAT3O94766 335 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ALPPP05187 535 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 EIF2S1P05198 315 aaKnown RBP5.28□□□□□ -1.56
VPS50-202ENST00000305866 CDK1P06493 297 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ADORA3P0DMS8 318 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ZNF30P17039 623 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 GADD45AP24522 165 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 TACR1P25103 407 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 ALDH4A1P30038 563 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 CRYBB2P43320 205 aa5.28□□□□□ -1.56
VPS50-202ENST00000305866 HMGA2P52926 109 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms