RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 VIRMAQ69YN4 1812 aaKnown RBP13.6□□□□□ -0.23
PRKCB-201ENST00000303531 ANKRD66B4E2M5 251 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 ACOX3O15254 700 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 UBXN7O94888 489 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 CLCN7P51798 805 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 RAB2AP61019 212 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 CREB5Q02930 508 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 TMEM74Q96NL1 305 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 PKP4Q99569 1192 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 THUMPD1Q9NXG2 353 aaKnown RBP13.6□□□□□ -0.23
PRKCB-201ENST00000303531 ZNF224Q9NZL3 707 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 NDRG2Q9UN36 371 aaKnown RBP13.6□□□□□ -0.23
PRKCB-201ENST00000303531 LOC730098B7Z3J9 87 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 H0YGN5 161 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 PSMD9O00233 223 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 ATP1B2P14415 290 aaPredicted RBP13.6□□□□□ -0.23
PRKCB-201ENST00000303531 GDF5P43026 501 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 AP1S2P56377 157 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 BNIP3Q12983 259 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 KLHL36Q8N4N3 616 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 ZSCAN5AQ9BUG6 496 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 SCML2Q9UQR0 700 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 NFS1Q9Y697 457 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 H3BSA7 217 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 MID1O15344 667 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 ZNF432O94892 652 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 ZNF823P16415 610 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 TLR1Q15399 786 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 WFIKKN2Q8TEU8 576 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 DDX1Q92499 740 aaKnown RBP13.6□□□□□ -0.23
PRKCB-201ENST00000303531 KCNA7Q96RP8 456 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 CCM2Q9BSQ5 444 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 WDR26Q9H7D7 661 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 IFT46Q9NQC8 304 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 G6PDP11413 515 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 CILP2Q8IUL8 1156 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 MCEMP1Q8IX19 187 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 ZSWIM3Q96MP5 696 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 ZDHHC4Q9NPG8 344 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 POFUT2Q9Y2G5 429 aa13.6□□□□□ -0.23
PRKCB-201ENST00000303531 DUXAA6NLW8 204 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 PDCD5O14737 125 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 C8BP07358 591 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 GDF6Q6KF10 455 aaPredicted RBP13.59□□□□□ -0.23
PRKCB-201ENST00000303531 DLK2Q6UY11 383 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 C9orf43Q8TAL5 461 aaPredicted RBP13.59□□□□□ -0.23
PRKCB-201ENST00000303531 RGMAQ96B86 450 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 YTHDF1Q9BYJ9 559 aaKnown RBP13.59□□□□□ -0.23
PRKCB-201ENST00000303531 SLC29A3Q9BZD2 475 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 DERL2Q9GZP9 239 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 ASB3Q9Y575 518 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 UBR1Q8IWV7 1749 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 LTN1O94822 1766 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 LOC100130705A0A1B0GUX0 176 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 MANBAO00462 879 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 BCHEP06276 602 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 BDKRB1P46663 353 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 PITPNAQ00169 270 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 OR2AP1Q8NGE2 309 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 CYB5D2Q8WUJ1 264 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 AUTS2Q8WXX7 1259 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 CFL2Q9Y281 166 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 CSNK2A2P19784 350 aaPredicted RBP13.59□□□□□ -0.23
PRKCB-201ENST00000303531 ANO7Q6IWH7 933 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 SIGLEC10Q96LC7 697 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 MKKSQ9NPJ1 570 aaPredicted RBP13.59□□□□□ -0.23
PRKCB-201ENST00000303531 UPB1Q9UBR1 384 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 A0A1W2PP18 115 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 SRPRAP08240 638 aaKnown RBP13.59□□□□□ -0.23
PRKCB-201ENST00000303531 FAM163BP0C2L3 166 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 OR2B6P58173 313 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 THOC6Q86W42 341 aaKnown RBP13.59□□□□□ -0.23
PRKCB-201ENST00000303531 PDSS2Q86YH6 399 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 SMOQ99835 787 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 PSAT1Q9Y617 370 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 TRBC2A0A5B9 178 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 CD2P06729 351 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 KCNE1P15382 129 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 DNAJB1P25685 340 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 TXNDC8Q6A555 127 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 JSRP1Q96MG2 331 aaPredicted RBP13.59□□□□□ -0.23
PRKCB-201ENST00000303531 SERPINA3P01011 423 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 TSPAN5P62079 268 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 RHDQ02161 417 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 INCA1Q0VD86 236 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 CLDN19Q8N6F1 224 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 KCTD7Q96MP8 289 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 SMURF2Q9HAU4 748 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 SIX4Q9UIU6 781 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 ROBO1Q9Y6N7 1651 aa13.59□□□□□ -0.23
PRKCB-201ENST00000303531 CBSLP0DN79 551 aa13.58□□□□□ -0.23
PRKCB-201ENST00000303531 CBSP35520 551 aa13.58□□□□□ -0.23
PRKCB-201ENST00000303531 STC1P52823 247 aa13.58□□□□□ -0.23
PRKCB-201ENST00000303531 Q6ZVU0 165 aa13.58□□□□□ -0.23
PRKCB-201ENST00000303531 BIRC7Q96CA5 298 aa13.58□□□□□ -0.23
PRKCB-201ENST00000303531 ZNF641Q96N77 438 aaPredicted RBP13.58□□□□□ -0.23
PRKCB-201ENST00000303531 DCSTAMPQ9H295 470 aa13.58□□□□□ -0.23
PRKCB-201ENST00000303531 A0A0U1RQF3 1178 aa13.58□□□□□ -0.24
PRKCB-201ENST00000303531 LSM1O15116 133 aaKnown RBP13.58□□□□□ -0.24
PRKCB-201ENST00000303531 ZNF8P17098 575 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms