RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CNTNAP4Q9C0A0 1308 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 A0A1W2PRB8 838 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 E9PAM4 449 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 SSX4O60224 188 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 POP4O95707 220 aaKnown RBP10.16□□□□□ -0.78
CLIP1-201ENST00000302528 PET100P0DJ07 73 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 FNTBP49356 437 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 MPP1Q00013 466 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 MAB21L1Q13394 359 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 FASTKD3Q14CZ7 662 aaKnown RBP10.16□□□□□ -0.78
CLIP1-201ENST00000302528 FAM174BQ3ZCQ3 159 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 C9orf43Q8TAL5 461 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-201ENST00000302528 SLC13A3Q8WWT9 602 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 YIPF4Q9BSR8 244 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 CHRAC1Q9NRG0 131 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 SCP2D1Q9UJQ7 156 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 H3BSH0 61 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 TLR4O00206 839 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 SCDO00767 359 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 PIP5K1BO14986 540 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 MAFO75444 373 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-201ENST00000302528 RAP2AP10114 183 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 GNAZP19086 355 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 MLLT3P42568 568 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-201ENST00000302528 ENTPD1P49961 510 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 SLC26A5P58743 744 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 CNTNAP1P78357 1384 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 DSC2Q02487 901 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 ABRAXAS2Q15018 415 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 SEC23AQ15436 765 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 ODF4Q2M2E3 257 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 ZACNQ401N2 412 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 CYP2U1Q7Z449 544 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 LRRC52Q8N7C0 313 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 ZBTB8BQ8NAP8 495 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-201ENST00000302528 SLC44A1Q8WWI5 657 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 NDC1Q9BTX1 674 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 TRMT61BQ9BVS5 477 aaKnown RBP10.16□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF717Q9BY31 904 aaPredicted RBP10.16□□□□□ -0.78
CLIP1-201ENST00000302528 TRIM36Q9NQ86 728 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 ZCCHC3Q9NUD5 404 aaKnown RBP10.16□□□□□ -0.78
CLIP1-201ENST00000302528 OR6C6A6NF89 314 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 PEX12O00623 359 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 PI15O43692 258 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 FAM155BO75949 473 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 IFNA5P01569 189 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 TPSB2P20231 275 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 MAGEA11P43364 429 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 ITPK1Q13572 414 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 SEC23BQ15437 767 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 TPSAB1Q15661 275 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 ATAD3CQ5T2N8 411 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 RFWD3Q6PCD5 774 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 PGM2L1Q6PCE3 622 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 SPATC1Q76KD6 591 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 STRADAQ7RTN6 431 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 MFSD2AQ8NA29 543 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 SIDT2Q8NBJ9 832 aaKnown RBP10.16□□□□□ -0.78
CLIP1-201ENST00000302528 THUMPD1Q9NXG2 353 aaKnown RBP10.16□□□□□ -0.78
CLIP1-201ENST00000302528 GNG13Q9P2W3 67 aa10.16□□□□□ -0.78
CLIP1-201ENST00000302528 CPED1A4D0V7 1026 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 J3QLW9 94 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 SAP18O00422 153 aaKnown RBP10.15□□□□□ -0.78
CLIP1-201ENST00000302528 KHNYNO15037 678 aaKnown RBP10.15□□□□□ -0.78
CLIP1-201ENST00000302528 ZNF19P17023 458 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 SHMT1P34896 483 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 CCNFP41002 786 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 HERC3Q15034 1050 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 MLIPQ5VWP3 458 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 ADGRD2Q7Z7M1 963 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 GLB1L3Q8NCI6 653 aaPredicted RBP10.15□□□□□ -0.78
CLIP1-201ENST00000302528 FBXO22Q8NEZ5 403 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 RGCCQ9H4X1 137 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 TMPRSS11EQ9UL52 423 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 TLL2Q9Y6L7 1015 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 ISPDA4D126 451 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 A8MUI8 341 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 RHOQP17081 205 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 MSX1P28360 303 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 MTPNP58546 118 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 RAB4BP61018 213 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 CAP1Q01518 475 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 GNMTQ14749 295 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 NTRK3Q16288 839 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 CYP27C1Q4G0S4 372 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 BARD1Q99728 777 aaKnown RBP10.15□□□□□ -0.78
CLIP1-201ENST00000302528 ASPNQ9BXN1 380 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 AMBNQ9NP70 447 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 PCDHGB6Q9Y5F9 930 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 FSCN2O14926 492 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 PLD2O14939 933 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 SLC22A1O15245 554 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 SLC16A8O95907 504 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 IFNA1P01562 189 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 PRDX6P30041 224 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 ADRA1BP35368 520 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 GRM5P41594 1212 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 GTF2BQ00403 316 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 CAPSQ13938 189 aa10.15□□□□□ -0.78
CLIP1-201ENST00000302528 PPM1JQ5JR12 505 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms