RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 ZNF45Q02386 682 aa9.91□□□□□ -0.82
CCDC36-201ENST00000296449 NPRL3Q12980 569 aa9.91□□□□□ -0.82
CCDC36-201ENST00000296449 SLX4IPQ5VYV7 408 aa9.91□□□□□ -0.82
CCDC36-201ENST00000296449 DESI1Q6ICB0 168 aa9.91□□□□□ -0.82
CCDC36-201ENST00000296449 ZCCHC8Q6NZY4 707 aaKnown RBP9.91□□□□□ -0.82
CCDC36-201ENST00000296449 FAHD1Q6P587 224 aa9.91□□□□□ -0.82
CCDC36-201ENST00000296449 CXCL17Q6UXB2 119 aa9.91□□□□□ -0.82
CCDC36-201ENST00000296449 MBOAT1Q6ZNC8 495 aa9.91□□□□□ -0.82
CCDC36-201ENST00000296449 CLDN19Q8N6F1 224 aa9.91□□□□□ -0.82
CCDC36-201ENST00000296449 UBTD2Q8WUN7 234 aa9.91□□□□□ -0.82
CCDC36-201ENST00000296449 PARK7Q99497 189 aaKnown RBP9.91□□□□□ -0.82
CCDC36-201ENST00000296449 CLPBQ9H078 707 aa9.91□□□□□ -0.82
CCDC36-201ENST00000296449 MIR1-1HGQ9H1L0 117 aa9.91□□□□□ -0.82
CCDC36-201ENST00000296449 RETREG1Q9H6L5 497 aa9.91□□□□□ -0.82
CCDC36-201ENST00000296449 PLXNA4Q9HCM2 1894 aa9.91□□□□□ -0.82
CCDC36-201ENST00000296449 RFXANKO14593 260 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 DSCR3O14972 297 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 ACSL4O60488 711 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 PDYNP01213 254 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 MAGP20916 626 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 THPOP40225 353 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 CTSKP43235 329 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 CDH4P55283 916 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 PRKCDQ05655 676 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 KRR1Q13601 381 aaKnown RBP9.9□□□□□ -0.82
CCDC36-201ENST00000296449 CPSF6Q16630 551 aaKnown RBP eCLIP9.9□□□□□ -0.82
CCDC36-201ENST00000296449 TPRG1LQ5T0D9 272 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 PNCKQ6P2M8 343 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 SERPINA11Q86U17 422 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 SAPCD2Q86UD0 394 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 SERPINA9Q86WD7 417 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 FAM9CQ8IZT9 166 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 CLIP4Q8N3C7 705 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 BEND7Q8N7W2 519 aaPredicted RBP9.9□□□□□ -0.82
CCDC36-201ENST00000296449 PROX1Q92786 737 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 PTPN18Q99952 460 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 COPS4Q9BT78 406 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 CDADC1Q9BWV3 514 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 SLC29A3Q9BZD2 475 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 THUMPD1Q9NXG2 353 aaKnown RBP9.9□□□□□ -0.82
CCDC36-201ENST00000296449 PCDHGA6Q9Y5G7 932 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 PRSS21Q9Y6M0 314 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 DPM1O60762 260 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 LRATO95237 230 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 SLC25A14O95258 325 aaPredicted RBP9.9□□□□□ -0.82
CCDC36-201ENST00000296449 ZNF7P17097 686 aaPredicted RBP9.9□□□□□ -0.82
CCDC36-201ENST00000296449 SDC1P18827 310 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 DGKAP23743 735 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 KDELR2P33947 212 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 GRK5P34947 590 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 CASP3P42574 277 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 CAMK2GQ13555 558 aaPredicted RBP9.9□□□□□ -0.82
CCDC36-201ENST00000296449 TBCEQ15813 527 aaPredicted RBP9.9□□□□□ -0.82
CCDC36-201ENST00000296449 VMACQ2NL98 169 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 THOC7Q6I9Y2 204 aaKnown RBP9.9□□□□□ -0.82
CCDC36-201ENST00000296449 OR4F3Q6IEY1 312 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 CERS6Q6ZMG9 384 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 USP43Q70EL4 1123 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 ZNF598Q86UK7 904 aaKnown RBP9.9□□□□□ -0.82
CCDC36-201ENST00000296449 MMAAQ8IVH4 418 aaKnown RBP9.9□□□□□ -0.82
CCDC36-201ENST00000296449 ZZZ3Q8IYH5 903 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 PARP16Q8N5Y8 322 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 CAPSLQ8WWF8 208 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 TESCQ96BS2 214 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 ZNF486Q96H40 463 aaPredicted RBP9.9□□□□□ -0.82
CCDC36-201ENST00000296449 HSH2DQ96JZ2 352 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 QPCTLQ9NXS2 382 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 NOD1Q9Y239 953 aa9.9□□□□□ -0.82
CCDC36-201ENST00000296449 EVPLLA8MZ36 301 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 GAPDHSO14556 408 aaPredicted RBP9.89□□□□□ -0.83
CCDC36-201ENST00000296449 KCNK5O95279 499 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 CLDN9O95484 217 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 KRT6AP02538 564 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 KRT6BP04259 564 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 PRPS2P11908 318 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 EPORP19235 508 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 RPS3P23396 243 aaKnown RBP eCLIP9.89□□□□□ -0.83
CCDC36-201ENST00000296449 KRT6CP48668 564 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 SGSHP51688 502 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 ITGA1P56199 1179 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 TWF1Q12792 350 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 TIGD6Q17RP2 521 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 GNASQ5JWF2 1037 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 MLIPQ5VWP3 458 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 FAM151BQ6UXP7 276 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 LINGO4Q6UY18 593 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 Q6ZPB1 254 aaPredicted RBP9.89□□□□□ -0.83
CCDC36-201ENST00000296449 MSANTD1Q6ZTZ1 278 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 USP50Q70EL3 339 aaPredicted RBP9.89□□□□□ -0.83
CCDC36-201ENST00000296449 SLC46A3Q7Z3Q1 461 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 METTL4Q8N3J2 472 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 AMER2Q8N7J2 671 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 HRASLS5Q96KN8 279 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 EGLN2Q96KS0 407 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 HHIPQ96QV1 700 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 GPR63Q9BZJ6 419 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 CRISPLD1Q9H336 500 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 REEP1Q9H902 201 aa9.89□□□□□ -0.83
CCDC36-201ENST00000296449 CCDC59Q9P031 241 aaKnown RBP9.89□□□□□ -0.83
CCDC36-201ENST00000296449 RNF181Q9P0P0 153 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms