RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 KCNC1P48547 511 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 PRKAA1Q13131 559 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 CALCOCO2Q13137 446 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 GPS2Q13227 327 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 ZKSCAN8Q15776 578 aaPredicted RBP8.8□□□□□ -1
HMGN1-201ENST00000288344 STRA8Q7Z7C7 330 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 PPP1R3BQ86XI6 285 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 NLGN4XQ8N0W4 816 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 OTUD6BQ8N6M0 293 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 C19orf47Q8N9M1 422 aaKnown RBP8.8□□□□□ -1
HMGN1-201ENST00000288344 NLGN4YQ8NFZ3 816 aaPredicted RBP8.8□□□□□ -1
HMGN1-201ENST00000288344 OR2L3Q8NG85 312 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 GPR22Q99680 433 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 FAM129AQ9BZQ8 928 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 SPRTNQ9H040 489 aaPredicted RBP8.8□□□□□ -1
HMGN1-201ENST00000288344 KLHL25Q9H0H3 589 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 PDE7BQ9NP56 450 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.8□□□□□ -1
HMGN1-201ENST00000288344 IL17BQ9UHF5 180 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 RALYQ9UKM9 306 aaKnown RBP8.8□□□□□ -1
HMGN1-201ENST00000288344 RARRES3Q9UL19 164 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 KLHL20Q9Y2M5 609 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 PCDHGA6Q9Y5G7 932 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 PCSK5Q92824 1860 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 COL6A6A6NMZ7 2263 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 GSAPA4D1B5 854 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 CTAGE15A4D2H0 777 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 E5RI56 91 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 VPS26AO75436 327 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 KIAA0754O94854 1291 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 MED26O95402 600 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 NTRK1P04629 796 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 CTAGE8P0CG41 777 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 LIFP15018 202 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 NPPBP16860 134 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 ZNF37AP17032 561 aaPredicted RBP8.8□□□□□ -1
HMGN1-201ENST00000288344 MAGP20916 626 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 CDH3P22223 829 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 PSMB5P28074 263 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 OAS2P29728 719 aaKnown RBP8.8□□□□□ -1
HMGN1-201ENST00000288344 PNLIPRP1P54315 467 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 UCNP55089 124 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 WDR4P57081 412 aaKnown RBP8.8□□□□□ -1
HMGN1-201ENST00000288344 SNRPNP63162 240 aaKnown RBP8.8□□□□□ -1
HMGN1-201ENST00000288344 PRDX1Q06830 199 aaKnown RBP8.8□□□□□ -1
HMGN1-201ENST00000288344 FOXM1Q08050 763 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 TUBB3Q13509 450 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 TTLL9Q3SXZ7 439 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 LINC00303Q3SY05 128 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 KBTBD12Q3ZCT8 623 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 SOWAHCQ53LP3 525 aaPredicted RBP8.8□□□□□ -1
HMGN1-201ENST00000288344 FAM45BPQ6NSW5 357 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 UGT3A1Q6NUS8 523 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 ARMC6Q6NXE6 501 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 C8orf74Q6P047 294 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 FIGLAQ6QHK4 219 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 C6orf15Q6UXA7 325 aaPredicted RBP8.8□□□□□ -1
HMGN1-201ENST00000288344 LRRC69Q6ZNQ3 347 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 CTAGE6Q86UF2 777 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 VASH2Q86V25 355 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 PAQR7Q86WK9 346 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 CTAGE4Q8IX94 777 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 KLHDC8AQ8IYD2 350 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 CACNA2D3Q8IZS8 1091 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 DSELQ8IZU8 1212 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 GALNT6Q8NCL4 622 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 FAM45AQ8TCE6 357 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 MAGEC3Q8TD91 643 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 SLC22A18Q96BI1 424 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 VPS39Q96JC1 886 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 SLC45A3Q96JT2 553 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 SGPP1Q9BX95 441 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 RAB11FIP5Q9BXF6 653 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 EPB41L4BQ9H329 900 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 PARVBQ9HBI1 364 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 POPDC3Q9HBV1 291 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 SLC6A20Q9NP91 592 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 LHX9Q9NQ69 397 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 SLC22A11Q9NSA0 550 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 PCMTD2Q9NV79 361 aa8.8□□□□□ -1
HMGN1-201ENST00000288344 FAM95CA0A1B0GW59 222 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 ISM1B1AKI9 464 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 MEN1O00255 615 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 ZBTB14O43829 449 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 KLF7O75840 302 aaPredicted RBP8.79□□□□□ -1
HMGN1-201ENST00000288344 FAM155BO75949 473 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 CATP04040 527 aaKnown RBP8.79□□□□□ -1
HMGN1-201ENST00000288344 C8GP07360 202 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 FURINP09958 794 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 HSD17B2P37059 387 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 TMPRSS3P57727 454 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 IL2P60568 153 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 POU4F1Q01851 419 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 DLG1Q12959 904 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 ZNF460Q14592 562 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 TLR1Q15399 786 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 COX20Q5RI15 118 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 LRRC8EQ6NSJ5 796 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 SUSD1Q6UWL2 747 aa8.79□□□□□ -1
HMGN1-201ENST00000288344 UBE2R2Q712K3 238 aaPredicted RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms