RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 E7EQ34 232 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 CASQ2O14958 399 aaPredicted RBP20.3■□□□□ 0.84
YBX3-202ENST00000279550 C1orf105O95561 183 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 SEMA4FO95754 770 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 MTAPQ13126 283 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 INPP5AQ14642 412 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 TRIP10Q15642 601 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 DOK6Q6PKX4 331 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 LMNTD1Q8N9Z9 388 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 OR56A3Q8NH54 315 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 DNAJB14Q8TBM8 379 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 MED8Q96G25 268 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 LINC00615Q96LM1 132 aaPredicted RBP20.3■□□□□ 0.84
YBX3-202ENST00000279550 ECSITQ9BQ95 431 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 RIMS3Q9UJD0 308 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 CYP8B1Q9UNU6 501 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 VEGFDO43915 354 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 BCKDHAP12694 445 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 HSD17B1P14061 328 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 JUPP14923 745 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 TEAD1P28347 426 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 TRIM23P36406 574 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 GTF2A1P52655 376 aaPredicted RBP20.3■□□□□ 0.84
YBX3-202ENST00000279550 CDK3Q00526 305 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 IRF8Q02556 426 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 MAD2L1Q13257 205 aaPredicted RBP20.3■□□□□ 0.84
YBX3-202ENST00000279550 NFE2L1Q14494 772 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 USP39Q53GS9 565 aaKnown RBP20.3■□□□□ 0.84
YBX3-202ENST00000279550 SFT2D3Q587I9 215 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 DPP10Q8N608 796 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 KRTCAP2Q8N6L1 136 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 CLHC1Q8NHS4 586 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 ATL1Q8WXF7 558 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 ASB12Q8WXK4 309 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 FOPNLQ96NB1 174 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 TMEM74Q96NL1 305 aa20.3■□□□□ 0.84
YBX3-202ENST00000279550 TCRBV3S1A0A5B6 114 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 SLC31A1O15431 190 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 ZNF217O75362 1048 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 APBB3O95704 486 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 DOC2AQ14183 400 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 XKR6Q5GH73 641 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 CACHD1Q5VU97 1274 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 FRG2Q64ET8 278 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 DLEU7Q6UYE1 221 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 SLCO4A1Q96BD0 722 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 TOE1Q96GM8 510 aaKnown RBP20.29■□□□□ 0.84
YBX3-202ENST00000279550 ZNF514Q96K75 400 aaPredicted RBP20.29■□□□□ 0.84
YBX3-202ENST00000279550 FRG2BQ96QU4 278 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 PKP2Q99959 881 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 LGR4Q9BXB1 951 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 TEX101Q9BY14 249 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 TPSD1Q9BZJ3 242 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 WDR26Q9H7D7 661 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 COPS7BQ9H9Q2 264 aaPredicted RBP20.29■□□□□ 0.84
YBX3-202ENST00000279550 FZD3Q9NPG1 666 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 C6orf203Q9P0P8 240 aaPredicted RBP20.29■□□□□ 0.84
YBX3-202ENST00000279550 NEUROG3Q9Y4Z2 214 aa20.29■□□□□ 0.84
YBX3-202ENST00000279550 C10orf142B7Z368 130 aa20.28■□□□□ 0.84
YBX3-202ENST00000279550 OXTRP30559 389 aa20.28■□□□□ 0.84
YBX3-202ENST00000279550 IGFALSP35858 605 aa20.28■□□□□ 0.84
YBX3-202ENST00000279550 GSK3BP49841 420 aa20.28■□□□□ 0.84
YBX3-202ENST00000279550 SIGLEC14Q08ET2 396 aa20.28■□□□□ 0.84
YBX3-202ENST00000279550 OGFRL1Q5TC84 451 aaPredicted RBP20.28■□□□□ 0.84
YBX3-202ENST00000279550 DHFR2Q86XF0 187 aa20.28■□□□□ 0.84
YBX3-202ENST00000279550 FBXO15Q8NCQ5 510 aaPredicted RBP20.28■□□□□ 0.84
YBX3-202ENST00000279550 OR2L2Q8NH16 312 aa20.28■□□□□ 0.84
YBX3-202ENST00000279550 HM13Q8TCT9 377 aa20.28■□□□□ 0.84
YBX3-202ENST00000279550 APIPQ96GX9 242 aa20.28■□□□□ 0.84
YBX3-202ENST00000279550 DPY30Q9C005 99 aa20.28■□□□□ 0.84
YBX3-202ENST00000279550 SLC23A2Q9UGH3 650 aa20.28■□□□□ 0.84
YBX3-202ENST00000279550 USP22Q9UPT9 525 aa20.28■□□□□ 0.84
YBX3-202ENST00000279550 OR1A2Q9Y585 309 aa20.28■□□□□ 0.84
YBX3-202ENST00000279550 DYTNA2CJ06 578 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 CLGNO14967 610 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 PRPH2P23942 346 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 ACADLP28330 430 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 MAPK9P45984 424 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 RHDQ02161 417 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 LIPJQ5W064 366 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 NANOGP8Q6NSW7 305 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 SPDYE1Q8NFV5 336 aaPredicted RBP20.27■□□□□ 0.84
YBX3-202ENST00000279550 ZNF480Q8WV37 535 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 CMTM7Q96FZ5 175 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 ZBTB18Q99592 522 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 ZDHHC5Q9C0B5 715 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 KLHL4Q9C0H6 718 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 NANOGQ9H9S0 305 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 WSB2Q9NYS7 404 aaPredicted RBP20.27■□□□□ 0.84
YBX3-202ENST00000279550 EGFL7Q9UHF1 273 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 GPR34Q9UPC5 381 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 DOCK9Q9BZ29 2069 aa20.27■□□□□ 0.84
YBX3-202ENST00000279550 C17orf113A0A1B0GUU1 675 aa20.27■□□□□ 0.83
YBX3-202ENST00000279550 SERTM1A2A2V5 107 aa20.27■□□□□ 0.83
YBX3-202ENST00000279550 MGAT4DA6NG13 374 aa20.27■□□□□ 0.83
YBX3-202ENST00000279550 ZNF839A8K0R7 811 aa20.27■□□□□ 0.83
YBX3-202ENST00000279550 IFRD1O00458 451 aaPredicted RBP20.27■□□□□ 0.83
YBX3-202ENST00000279550 LATO43561 262 aa20.27■□□□□ 0.83
YBX3-202ENST00000279550 TACR1P25103 407 aa20.27■□□□□ 0.83
YBX3-202ENST00000279550 CD6P30203 668 aa20.27■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms