RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 DCLRE1BQ9H816 532 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 IL1RL2Q9HB29 575 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 CROTQ9UKG9 612 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 IFRD1O00458 451 aaPredicted RBP11.71□□□□□ -0.53
SDE2-201ENST00000272091 KELP23276 732 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 DGKQP52824 942 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 CYP2A13Q16696 494 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 ATG9BQ674R7 924 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 SLC2A7Q6PXP3 512 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 GALNT13Q8IUC8 556 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 LINC01555Q8NAE3 123 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 NRG4Q8WWG1 115 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 CMTM7Q96FZ5 175 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 MAGEB10Q96LZ2 347 aaPredicted RBP11.71□□□□□ -0.53
SDE2-201ENST00000272091 MTERF1Q99551 399 aaKnown RBP11.71□□□□□ -0.53
SDE2-201ENST00000272091 GEMIN8Q9NWZ8 242 aaKnown RBP11.71□□□□□ -0.53
SDE2-201ENST00000272091 ABCD2Q9UBJ2 740 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 ACSL5Q9ULC5 683 aa11.71□□□□□ -0.53
SDE2-201ENST00000272091 CHURC1-FNTBB4DL54 471 aa11.71□□□□□ -0.54
SDE2-201ENST00000272091 CACNB4O00305 520 aaPredicted RBP11.71□□□□□ -0.54
SDE2-201ENST00000272091 NME4O00746 187 aa11.71□□□□□ -0.54
SDE2-201ENST00000272091 EML2O95834 649 aa11.71□□□□□ -0.54
SDE2-201ENST00000272091 KCNK10P57789 538 aa11.71□□□□□ -0.54
SDE2-201ENST00000272091 NFATC4Q14934 902 aa11.71□□□□□ -0.54
SDE2-201ENST00000272091 SF1Q15637 639 aaKnown RBP11.71□□□□□ -0.54
SDE2-201ENST00000272091 TMEM145Q8NBT3 493 aa11.71□□□□□ -0.54
SDE2-201ENST00000272091 OR7G3Q8NG95 312 aa11.71□□□□□ -0.54
SDE2-201ENST00000272091 CLHC1Q8NHS4 586 aa11.71□□□□□ -0.54
SDE2-201ENST00000272091 RAD51AP1Q96B01 352 aa11.71□□□□□ -0.54
SDE2-201ENST00000272091 OSGEPL1Q9H4B0 414 aa11.71□□□□□ -0.54
SDE2-201ENST00000272091 SGK2Q9HBY8 427 aa11.71□□□□□ -0.54
SDE2-201ENST00000272091 GPSM3Q9Y4H4 160 aa11.71□□□□□ -0.54
SDE2-201ENST00000272091 FANCMQ8IYD8 2048 aa11.71□□□□□ -0.54
SDE2-201ENST00000272091 KLHL33A6NCF5 533 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 CCDC154A6NI56 674 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 ANGPT2O15123 496 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 SLC35G4P0C7Q5 338 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 SDC1P18827 310 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 HNRNPA2B1P22626 353 aaKnown RBP11.7□□□□□ -0.54
SDE2-201ENST00000272091 HNF4AP41235 474 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 MEF2AQ02078 507 aaPredicted RBP11.7□□□□□ -0.54
SDE2-201ENST00000272091 CSTF3Q12996 717 aaKnown RBP11.7□□□□□ -0.54
SDE2-201ENST00000272091 C6orf10Q5SRN2 563 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 SYT13Q7L8C5 426 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 MINDY1Q8N5J2 469 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 CLMPQ9H6B4 373 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 CCDC177Q9NQR7 707 aaPredicted RBP11.7□□□□□ -0.54
SDE2-201ENST00000272091 PRDM8Q9NQV8 689 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 CMTM6Q9NX76 183 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 USP34Q70CQ2 3546 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 MAGEB17A8MXT2 336 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 SEMA4FO95754 770 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 PSMB5P28074 263 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 RAE1P78406 368 aaKnown RBP11.7□□□□□ -0.54
SDE2-201ENST00000272091 ICE2Q659A1 982 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 LCTLQ6UWM7 567 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 ZNF852Q6ZMS4 543 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 KIAA2013Q8IYS2 634 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 LRRC58Q96CX6 371 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 C12orf66Q96MD2 445 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 HHIPQ96QV1 700 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 SPAG4Q9NPE6 437 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 ADA2Q9NZK5 511 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 EIF3LQ9Y262 564 aaKnown RBP11.7□□□□□ -0.54
SDE2-201ENST00000272091 PCDHA9Q9Y5H5 950 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 KCNE2Q9Y6J6 123 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 SLCO1B1Q9Y6L6 691 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 OR52A4PA6NMU1 304 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 H3BNX3 289 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 TRIM38O00635 465 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 MAN2B1O00754 1011 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 C1GALT1C1LP0DN25 315 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 SLC6A2P23975 617 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 SLC7A2P52569 658 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 PHC1P78364 1004 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 MAD2L1Q13257 205 aaPredicted RBP11.7□□□□□ -0.54
SDE2-201ENST00000272091 TSTA3Q13630 321 aaPredicted RBP11.7□□□□□ -0.54
SDE2-201ENST00000272091 NXPE4Q6UWF7 544 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 DLEU7Q6UYE1 221 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 VN1R5Q7Z5H4 357 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 LAS2Q8IYD9 372 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 TBC1D21Q8IYX1 336 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 ZNF740Q8NDX6 193 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 HUS1BQ8NHY5 278 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 SLC5A11Q8WWX8 675 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 TRIT1Q9H3H1 467 aaKnown RBP11.7□□□□□ -0.54
SDE2-201ENST00000272091 LMAN1LQ9HAT1 526 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 PRDM6Q9NQX0 595 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 MOSPD1Q9UJG1 213 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 PPT2Q9UMR5 302 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 CYP8B1Q9UNU6 501 aa11.7□□□□□ -0.54
SDE2-201ENST00000272091 FPGTO14772 594 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 FOSL2P15408 326 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 TCN1P20061 433 aaPredicted RBP11.69□□□□□ -0.54
SDE2-201ENST00000272091 ME2P23368 584 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 SLBPQ14493 270 aaKnown RBP eCLIP11.69□□□□□ -0.54
SDE2-201ENST00000272091 PRAMEF14Q5SWL7 426 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 PRAMEF13Q5VWM6 474 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 SLC15A3Q8IY34 581 aa11.69□□□□□ -0.54
SDE2-201ENST00000272091 CCL4L1Q8NHW4 92 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms