RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 CCDC177Q9NQR7 707 aaPredicted RBP6.97□□□□□ -1.29
DEPDC1B-201ENST00000265036 SPATA7Q9P0W8 599 aa6.97□□□□□ -1.29
DEPDC1B-201ENST00000265036 RARRES3Q9UL19 164 aa6.97□□□□□ -1.29
DEPDC1B-201ENST00000265036 ASB1Q9Y576 335 aa6.97□□□□□ -1.29
DEPDC1B-201ENST00000265036 NBASA2RRP1 2371 aa6.97□□□□□ -1.29
DEPDC1B-201ENST00000265036 RP1L1Q8IWN7 2480 aaPredicted RBP6.97□□□□□ -1.29
DEPDC1B-201ENST00000265036 UBXN8O00124 270 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 EIF3FO00303 357 aaPredicted RBP6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 PRICKLE3O43900 615 aaPredicted RBP6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 DXOO77932 396 aaKnown RBP6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 EIF2S1P05198 315 aaKnown RBP6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 ABHD2P08910 425 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 ERGP11308 486 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 TNFRSF8P28908 595 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 HSD17B3P37058 310 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 KCNC1P48547 511 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 SERPINB8P50452 374 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 MC2RQ01718 297 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 TGFBIQ15582 683 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 CYP2A13Q16696 494 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 PTCHD3Q3KNS1 767 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 TAF1BQ53T94 588 aaPredicted RBP6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 PRAMEF13Q5VWM6 474 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 ICE2Q659A1 982 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 FCRL6Q6DN72 434 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 FRMPD2BQ6IN97 320 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 FAM199XQ6PEV8 388 aaPredicted RBP6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 FIGLAQ6QHK4 219 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 TIPARPQ7Z3E1 657 aaKnown RBP6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 ADAMTSL2Q86TH1 951 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 LSMEM2Q8N112 164 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 IL22RA1Q8N6P7 574 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 SLC38A9Q8NBW4 561 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 ZNF578Q96N58 590 aaPredicted RBP6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 MACROD1Q9BQ69 325 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 DERL2Q9GZP9 239 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 MRPS30Q9NP92 439 aaKnown RBP6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 ACSS2Q9NR19 701 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 IGSF5Q9NSI5 407 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 INTS7Q9NVH2 962 aaKnown RBP6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 DHCR7Q9UBM7 475 aaKnown RBP6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 RNF112Q9ULX5 631 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 BTRCQ9Y297 605 aa6.96□□□□□ -1.29
DEPDC1B-201ENST00000265036 LOC105369274A0A096LPK9 316 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 LOC102723532A0A0G2JNH3 316 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 TLDC2A0PJX2 215 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 FEZF1A0PJY2 475 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 SRRM3A6NNA2 597 aaPredicted RBP6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 B4E171 279 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 SUPT3HB4E1H0 165 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 STMND1H3BQB6 276 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 H7BY64 318 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 TK2O00142 265 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 NVLO15381 856 aaKnown RBP6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 TOX3O15405 576 aaPredicted RBP6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 SUPT3HO75486 399 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 SCRG1O75711 98 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 CDH1P12830 882 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 TSPAN7P41732 249 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 HSPA7P48741 367 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 VSX2P58304 361 aaPredicted RBP6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 RAB15P59190 212 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 TUBB4BP68371 445 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 SLC5A12Q1EHB4 618 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 TMTC4Q5T4D3 741 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 C1orf189Q5VU69 101 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 FAM219BQ5XKK7 198 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 CEACAM20Q6UY09 585 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 CLEC14AQ86T13 490 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 SPACA3Q8IXA5 215 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 LRRC56Q8IYG6 542 aaPredicted RBP6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 OR4N4Q8N0Y3 316 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 ZNF655Q8N720 491 aaPredicted RBP6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 AENQ8WTP8 325 aaKnown RBP6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 UBXN10Q96LJ8 280 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 CCDC138Q96M89 665 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 PRAP1Q96NZ9 151 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 OR4K3Q96R72 315 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 RUFY1Q96T51 708 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 FUT8Q9BYC5 575 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 ASPSCR1Q9BZE9 553 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 SPRTNQ9H040 489 aaPredicted RBP6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 POPDC3Q9HBV1 291 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 CPNE5Q9HCH3 593 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 WWOXQ9NZC7 414 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 CD274Q9NZQ7 290 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 CPSF2Q9P2I0 782 aaKnown RBP6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 TLK1Q9UKI8 766 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 SLC22A14Q9Y267 594 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 ACOT9Q9Y305 439 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 PCDHB11Q9Y5F2 797 aa6.96□□□□□ -1.3
DEPDC1B-201ENST00000265036 MED13Q9UHV7 2174 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 LRRC14BA6NHZ5 514 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 HAT1O14929 419 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 OR2B3O76000 313 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 KRT38O76015 456 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 LTA4HP09960 611 aaKnown RBP6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 CMPK1P30085 196 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 AGTR2P50052 363 aa6.95□□□□□ -1.3
DEPDC1B-201ENST00000265036 ERVPABLB-1P60509 514 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms