RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 GPR1P46091 355 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 PPIGQ13427 754 aaKnown RBP eCLIP15.86■□□□□ 0.132e-6■■□□□ 14.2
CTCF-201ENST00000264010 NDUFA5Q16718 116 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 XKR7Q5GH72 579 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 TERB1Q8NA31 727 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 ING5Q8WYH8 240 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 ZNF597Q96LX8 424 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 SLC29A1Q99808 456 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 ZSCAN5AQ9BUG6 496 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 POLE4Q9NR33 117 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 GMPR2Q9P2T1 348 aaKnown RBP15.86■□□□□ 0.13
CTCF-201ENST00000264010 G3V2T6 193 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 H0YC42 278 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 PER2O15055 1255 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 MPC1LP0DKB6 136 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 DGKGP49619 791 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 CDKL4Q5MAI5 379 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 FRG2Q64ET8 278 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 Q6ZSR9 355 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 Q6ZVL8 140 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 CYP2U1Q7Z449 544 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 PROKR1Q8TCW9 393 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 FRG2BQ96QU4 278 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 MIR1-1HGQ9H1L0 117 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 ABCD2Q9UBJ2 740 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 KLHL20Q9Y2M5 609 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 WNT6Q9Y6F9 365 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 AP2A2O94973 939 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 GGT5P36269 586 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 OR4D2P58180 307 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 CAMK2GQ13555 558 aaPredicted RBP15.86■□□□□ 0.13
CTCF-201ENST00000264010 RAET1GQ6H3X3 334 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 Q6ZNB5 142 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 ANKRD46Q86W74 232 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 OR2T11Q8NH01 316 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 LKAAEAR1Q8TD35 194 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 PPP1R16AQ96I34 528 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 IL21Q9HBE4 155 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 SGK2Q9HBY8 427 aa15.86■□□□□ 0.13
CTCF-201ENST00000264010 H3BM21 787 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 TIMP1P01033 207 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 YAP1P46937 504 aaKnown RBP15.85■□□□□ 0.13
CTCF-201ENST00000264010 ZCCHC8Q6NZY4 707 aaKnown RBP15.85■□□□□ 0.13
CTCF-201ENST00000264010 PHYKPLQ8IUZ5 450 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 ADGRG5Q8IZF4 528 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 RAB42Q8N4Z0 105 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 SCAMP4Q969E2 229 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 CPEB1Q9BZB8 566 aaKnown RBP15.85■□□□□ 0.13
CTCF-201ENST00000264010 IL36AQ9UHA7 158 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 PADI4Q9UM07 663 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 TSC2P49815 1807 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 LOC100506127A0A0U1RQW1 187 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 A8MV72 311 aaPredicted RBP15.85■□□□□ 0.13
CTCF-201ENST00000264010 DFNA5O60443 496 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 PRNPP04156 253 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 THRBP10828 461 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 CDK4P11802 303 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 TRAF3Q13114 568 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 DSG4Q86SJ6 1040 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 CHST14Q8NCH0 376 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 HMGCLL1Q8TB92 370 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 OR8D1Q8WZ84 308 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 COPS4Q9BT78 406 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 C3orf18Q9UK00 162 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 RPS6KA6Q9UK32 745 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 ERVW-1Q9UQF0 538 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 PCDHA9Q9Y5H5 950 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 OR7A17O14581 309 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 SLC16A5O15375 505 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 PRIM2P49643 509 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 ATP6AP1Q15904 470 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 CYP2A13Q16696 494 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 TMEM220Q6QAJ8 160 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 CHST15Q7LFX5 561 aaPredicted RBP15.85■□□□□ 0.13
CTCF-201ENST00000264010 WFIKKN2Q8TEU8 576 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 CMTM7Q96FZ5 175 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 PAK6Q9NQU5 681 aaPredicted RBP15.85■□□□□ 0.13
CTCF-201ENST00000264010 DUS2Q9NX74 493 aaKnown RBP15.85■□□□□ 0.13
CTCF-201ENST00000264010 PDE10AQ9Y233 779 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 MED16Q9Y2X0 877 aa15.85■□□□□ 0.13
CTCF-201ENST00000264010 MIA3Q5JRA6 1907 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 ARNTLO00327 626 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 SOCS2O14508 198 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 RHOP08100 348 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 BCKDHAP12694 445 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 GPR65Q8IYL9 337 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 GALNT6Q8NCL4 622 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 OR7A2PQ8NGA2 310 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 SMAD5Q99717 465 aaKnown RBP15.84■□□□□ 0.13
CTCF-201ENST00000264010 WRAP53Q9BUR4 548 aaKnown RBP15.84■□□□□ 0.13
CTCF-201ENST00000264010 OR51B4Q9Y5P0 310 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 A0A1B0GTL3 188 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 LEFTY1O75610 366 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 HLA-FP30511 346 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 SRSF11Q05519 484 aaKnown RBP15.84■□□□□ 0.13
CTCF-201ENST00000264010 DPY19L1Q2PZI1 675 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 GALNT13Q8IUC8 556 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 OTUB2Q96DC9 234 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 NTMT1Q9BV86 223 aa15.84■□□□□ 0.13
CTCF-201ENST00000264010 SLC12A9Q9BXP2 914 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms