RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 KLHL25Q9H0H3 589 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 GPN2Q9H9Y4 310 aaPredicted RBP8.87□□□□□ -0.99
MSH4-201ENST00000263187 RAPGEFL1Q9UHV5 662 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 ABT1Q9ULW3 272 aaKnown RBP8.87□□□□□ -0.99
MSH4-201ENST00000263187 BTBD3Q9Y2F9 522 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 CHD5Q8TDI0 1954 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 CLIC1O00299 241 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 KDM1AO60341 852 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 KRT6AP02538 564 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 KRT6BP04259 564 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 ANXA5P08758 320 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 COX7A2P14406 83 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 HMGA1P17096 107 aaKnown RBP8.87□□□□□ -0.99
MSH4-201ENST00000263187 JUNBP17275 347 aaPredicted RBP8.87□□□□□ -0.99
MSH4-201ENST00000263187 KRT6CP48668 564 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 TMED10P49755 219 aaKnown RBP8.87□□□□□ -0.99
MSH4-201ENST00000263187 BTG3Q14201 252 aaPredicted RBP8.87□□□□□ -0.99
MSH4-201ENST00000263187 PRSS36Q5K4E3 855 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 DGKKQ5KSL6 1271 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 GPRC6AQ5T6X5 926 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 LRRC66Q68CR7 880 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 SNX20Q7Z614 316 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 P2RY8Q86VZ1 359 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 PLD3Q8IV08 490 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 CACTIN-AS1Q8N1I8 211 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 LILRA3Q8N6C8 439 aaPredicted RBP8.87□□□□□ -0.99
MSH4-201ENST00000263187 HSH2DQ96JZ2 352 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 P2RY13Q9BPV8 354 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 CFHR5Q9BXR6 569 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.87□□□□□ -0.99
MSH4-201ENST00000263187 ATP13A3Q9H7F0 1226 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 C8orf4Q9NR00 106 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 KRT84Q9NSB2 600 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 TBCCD1Q9NVR7 557 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 TAS2R16Q9NYV7 291 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 SLCO3A1Q9UIG8 710 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 RIMKLBQ9ULI2 386 aa8.87□□□□□ -0.99
MSH4-201ENST00000263187 CAB39Q9Y376 341 aaPredicted RBP8.87□□□□□ -0.99
MSH4-201ENST00000263187 EVPLLA8MZ36 301 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 UGT2B11O75310 529 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 DNTTP04053 509 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 PBLDP30039 288 aaPredicted RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 CD70P32970 193 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 FCGRTP55899 365 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 CLCA4Q14CN2 919 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 COLEC12Q5KU26 742 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 OR2T5Q6IEZ7 315 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 TRAF7Q6Q0C0 670 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 CYP2U1Q7Z449 544 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 SLC22A16Q86VW1 577 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 CCDC71Q8IV32 467 aaPredicted RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 CADM3Q8N126 398 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 CLIP4Q8N3C7 705 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 OR2T29Q8NH02 315 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 SPPL2AQ8TCT8 520 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 MAGED4Q96JG8 741 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 ZDHHC6Q9H6R6 413 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 THG1LQ9NWX6 298 aaKnown RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 PCDHB1Q9Y5F3 818 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 MYOFQ9NZM1 2061 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 MANSC4A6NHS7 340 aaPredicted RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 TRBC1P01850 177 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 UGT2B4P06133 528 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 LAMP1P11279 417 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 CD36P16671 472 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 WEE1P30291 646 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 KRT20P35900 424 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 KIR3DL1P43629 444 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 ALDH7A1P49419 539 aaKnown RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 CLK1P49759 484 aaKnown RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 ARHGDIAP52565 204 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 CRISP3P54108 245 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 ATN1P54259 1190 aaPredicted RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 HTRA3P83110 453 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 EPS8Q12929 822 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 CHIT1Q13231 466 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 INAVAQ3KP66 663 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 SPATS1Q496A3 300 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 IER5LQ5T953 404 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 REM2Q8IYK8 340 aaPredicted RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 CHPFQ8IZ52 775 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 NLGN4XQ8N0W4 816 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 SVOPLQ8N434 492 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 UTP15Q8TED0 518 aaKnown RBP8.86□□□□□ -0.99
MSH4-201ENST00000263187 SPATA17Q96L03 361 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 CCDC115Q96NT0 180 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 ZNF347Q96SE7 839 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 SH3GL1Q99961 368 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 HEPHQ9BQS7 1158 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 MARCH7Q9H992 704 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 MAGEE1Q9HCI5 957 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 STARD7Q9NQZ5 370 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 TMEM184CQ9NVA4 438 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 TMEM161AQ9NX61 479 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 SH3BP4Q9P0V3 963 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 SLC6A14Q9UN76 642 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 NINQ8N4C6 2090 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 MYO15AQ9UKN7 3530 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 LINC00854A0A1B0GVQ3 168 aa8.86□□□□□ -0.99
MSH4-201ENST00000263187 PABPN1LA6NDY0 278 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms