RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 RASGEF1AQ8N9B8 481 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 OR10V1Q8NGI7 309 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 DEPDC1BQ8WUY9 529 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 PIGBQ92521 554 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 FAM71F1Q96KD3 344 aaPredicted RBP4.02□□□□□ -1.77
CCDC54-201ENST00000261058 GPATCH1Q9BRR8 931 aaKnown RBP4.02□□□□□ -1.77
CCDC54-201ENST00000261058 KATNB1Q9BVA0 655 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 XAB2Q9HCS7 855 aaKnown RBP4.02□□□□□ -1.77
CCDC54-201ENST00000261058 CACNG4Q9UBN1 327 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 AGTPBP1Q9UPW5 1226 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 TCF19Q9Y242 345 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 TMED3Q9Y3Q3 217 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 HEG1Q9ULI3 1381 aa4.02□□□□□ -1.77
CCDC54-201ENST00000261058 FANCIQ9NVI1 1328 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 TCF20Q9UGU0 1960 aaKnown RBP4.01□□□□□ -1.77
CCDC54-201ENST00000261058 TRAV24A0A0B4J272 114 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 HTR3EA5X5Y0 456 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 ENO4A6NNW6 628 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 PMS2P5A8MQ11 134 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 PES1O00541 588 aaKnown RBP4.01□□□□□ -1.77
CCDC54-201ENST00000261058 CIDEAO60543 219 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 CLPTM1O96005 669 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 PRSS1P07477 247 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 RPS2P15880 293 aaKnown RBP4.01□□□□□ -1.77
CCDC54-201ENST00000261058 CDKN1AP38936 164 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 PPARDQ03181 441 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 BFSP1Q12934 665 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 CCDC6Q16204 474 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 UGCGQ16739 394 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 UGP2Q16851 508 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 XKR6Q5GH73 641 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 XKR3Q5GH77 459 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 SUSD4Q5VX71 490 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 CNSTQ6PJW8 725 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 CEACAM20Q6UY09 585 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 C11orf57Q6ZUT1 292 aaPredicted RBP4.01□□□□□ -1.77
CCDC54-201ENST00000261058 FAM47EQ6ZV65 393 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 SPATA19Q7Z5L4 167 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 TIGD4Q8IY51 512 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 DNAJC22Q8N4W6 341 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 ANKRD13CQ8N6S4 541 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 LRRC8CQ8TDW0 803 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 ZNF501Q96CX3 271 aaPredicted RBP4.01□□□□□ -1.77
CCDC54-201ENST00000261058 JAKMIP1Q96N16 626 aaKnown RBP4.01□□□□□ -1.77
CCDC54-201ENST00000261058 SLC2A11Q9BYW1 496 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 OR2B2Q9GZK3 357 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 MIS12Q9H081 205 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 CPVLQ9H3G5 476 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 FN3KQ9H479 309 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 BLOC1S6Q9UL45 172 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 STUB1Q9UNE7 303 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 RABL2BQ9UNT1 228 aa4.01□□□□□ -1.77
CCDC54-201ENST00000261058 MYH14Q7Z406 1995 aaKnown RBP4□□□□□ -1.77
CCDC54-201ENST00000261058 ANKRD61A6NGH8 418 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 C2orf81A6NN90 581 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 H0Y626 953 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 BLOC1S5-TXNDC5H3BN57 136 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 RTCAO00442 366 aaKnown RBP4□□□□□ -1.77
CCDC54-201ENST00000261058 ARPC2O15144 300 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 PCDH7O60245 1069 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 B3GALNT1O75752 331 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 GBAP04062 536 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 SP1P08047 785 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 PRSS56P0CW18 603 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 THEGLP0DJG4 465 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 ACAT1P24752 427 aaKnown RBP4□□□□□ -1.77
CCDC54-201ENST00000261058 TIA1P31483 386 aaKnown RBP eCLIP4□□□□□ -1.77
CCDC54-201ENST00000261058 CEACAM8P31997 349 aaPredicted RBP4□□□□□ -1.77
CCDC54-201ENST00000261058 HPDP32754 393 aaPredicted RBP4□□□□□ -1.77
CCDC54-201ENST00000261058 VAMP7P51809 220 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 TUBB4BP68371 445 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 KLC1Q07866 573 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 TUBB2AQ13885 445 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 TAF13Q15543 124 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 ARHGAP17Q68EM7 881 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 CAVIN1Q6NZI2 390 aaKnown RBP4□□□□□ -1.77
CCDC54-201ENST00000261058 NOTUMQ6P988 496 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 UNC5DQ6UXZ4 953 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 RAPH1Q70E73 1250 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 DNAJB7Q7Z6W7 309 aaPredicted RBP4□□□□□ -1.77
CCDC54-201ENST00000261058 RTN4RL2Q86UN3 420 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 PIGZQ86VD9 579 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 FAM219AQ8IW50 185 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 OR4K1Q8NGD4 311 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 OR10Q1Q8NGQ4 319 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 SETD6Q8TBK2 473 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 SPATA18Q8TC71 538 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 MGARPQ8TDB4 240 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 TMEM190Q8WZ59 177 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 TSGA13Q96PP4 275 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 TUBB2BQ9BVA1 445 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 SHARPINQ9H0F6 387 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 TLE6Q9H808 572 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 GSN-AS1Q9NRJ2 163 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 TBK1Q9UHD2 729 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 SNX7Q9UNH6 387 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 RIPK3Q9Y572 518 aa4□□□□□ -1.77
CCDC54-201ENST00000261058 ZFP37Q9Y6Q3 630 aaPredicted RBP4□□□□□ -1.77
CCDC54-201ENST00000261058 C5orf52A6NGY3 159 aa3.99□□□□□ -1.77
CCDC54-201ENST00000261058 C2CD4DB7Z1M9 353 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms