RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 SPATC1Q76KD6 591 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 OXR1Q8N573 874 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 NAT8LQ8N9F0 302 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 PIK3R3Q92569 461 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 PKP4Q99569 1192 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 POLR2J3Q9H1A7 115 aaKnown RBP11.81□□□□□ -0.52
COL8A1-201ENST00000261037 UTS2RQ9UKP6 389 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 GRXCR1A8MXD5 290 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 PDLIM1O00151 329 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 LDB2O43679 373 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 REM1O75628 298 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 FCER2P06734 321 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 ACSL1P33121 698 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 LIN52Q52LA3 116 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 ZDHHC24Q6UX98 284 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 GOLGA7Q7Z5G4 137 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 THOC6Q86W42 341 aaKnown RBP11.81□□□□□ -0.52
COL8A1-201ENST00000261037 C10orf82Q8WW14 230 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 TMEM203Q969S6 136 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 RAB11FIP5Q9BXF6 653 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 EBF2Q9HAK2 575 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 CENPMQ9NSP4 180 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 ZCCHC3Q9NUD5 404 aaKnown RBP11.81□□□□□ -0.52
COL8A1-201ENST00000261037 DMAC2Q9NW81 257 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 OXSMQ9NWU1 459 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 A8MT66 165 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 TLX3O43711 291 aaPredicted RBP11.81□□□□□ -0.52
COL8A1-201ENST00000261037 ECHS1P30084 290 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 GDF5P43026 501 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 IQCCQ4KMZ1 466 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 CRB2Q5IJ48 1285 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 DGLUCYQ7Z3D6 616 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 OR4E2Q8NGC2 313 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 RGMAQ96B86 450 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 IL4I1Q96RQ9 567 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 MNTQ99583 582 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 TMED9Q9BVK6 235 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 VPS29Q9UBQ0 182 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 ZDHHC2Q9UIJ5 367 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 TELO2Q9Y4R8 837 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 EFCAB9A8MZ26 197 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 GATBO75879 557 aaKnown RBP11.81□□□□□ -0.52
COL8A1-201ENST00000261037 LDOC1O95751 146 aaPredicted RBP11.81□□□□□ -0.52
COL8A1-201ENST00000261037 GNSP15586 552 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 VIPR1P32241 457 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 GDI2P50395 445 aaKnown RBP11.81□□□□□ -0.52
COL8A1-201ENST00000261037 CDKL1Q00532 357 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 PPP1R8Q12972 351 aaKnown RBP11.81□□□□□ -0.52
COL8A1-201ENST00000261037 TIGD6Q17RP2 521 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 MOCS1Q9NZB8 636 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 PDCD5O14737 125 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 TBX1O43435 398 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 CH25HO95992 272 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 SERPINA3P01011 423 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 SLC7A1P30825 629 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 GKP32189 559 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 BLKP51451 505 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 RBM20Q5T481 1227 aaKnown RBP11.81□□□□□ -0.52
COL8A1-201ENST00000261037 METTL27Q8N6F8 245 aaPredicted RBP11.81□□□□□ -0.52
COL8A1-201ENST00000261037 HCAR2Q8TDS4 363 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 WFIKKN2Q8TEU8 576 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 OR52B2Q96RD2 323 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 TIMMDC1Q9NPL8 285 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 DLG5Q8TDM6 1919 aa11.81□□□□□ -0.52
COL8A1-201ENST00000261037 TLR4O00206 839 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 ARPC2O15144 300 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 RB1P06400 928 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 HSD11B1P28845 292 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 ADAM17P78536 824 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 COL9A2Q14055 689 aaPredicted RBP11.8□□□□□ -0.52
COL8A1-201ENST00000261037 KLHL22Q53GT1 634 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 PRPF38BQ5VTL8 546 aaKnown RBP11.8□□□□□ -0.52
COL8A1-201ENST00000261037 KLHL36Q8N4N3 616 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 KCNK6Q9Y257 313 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 A0A1B0GVT2 93 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF726A6NNF4 738 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 CDH1P12830 882 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 HLA-EP13747 358 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF3P17036 446 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 MAP3K8P41279 467 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 RORCP51449 518 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 TAS2R50P59544 299 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 ENPP2Q13822 863 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 TNFAIP8L3Q5GJ75 292 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 COLEC12Q5KU26 742 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 TPGS2Q68CL5 300 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 QSOX2Q6ZRP7 698 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 ASB18Q6ZVZ8 466 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 P4HA3Q7Z4N8 544 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 CCDC36Q8IYA8 594 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 GLB1L3Q8NCI6 653 aaPredicted RBP11.8□□□□□ -0.52
COL8A1-201ENST00000261037 PDPRQ8NCN5 879 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 LMX1AQ8TE12 382 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 KCNA7Q96RP8 456 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 MIPEPQ99797 713 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 POLR2J2Q9GZM3 115 aaKnown RBP11.8□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF395Q9H8N7 513 aaPredicted RBP11.8□□□□□ -0.52
COL8A1-201ENST00000261037 UCKL1Q9NWZ5 548 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 GIN1Q9NXP7 522 aa11.8□□□□□ -0.52
COL8A1-201ENST00000261037 TAS2R7Q9NYW3 318 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms