RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 E2F2Q14209 437 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 NFATC4Q14934 902 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 RCN1Q15293 331 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 TCEA2Q15560 299 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 SYT13Q7L8C5 426 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 ENDOVQ8N8Q3 282 aaKnown RBP21.62■■□□□ 1.05
SIX3-201ENST00000260653 OR1E3Q8WZA6 343 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 ITFG2Q969R8 447 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 MENTQ9BUN1 341 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 IMP3Q9NV31 184 aaKnown RBP21.62■■□□□ 1.05
SIX3-201ENST00000260653 ASIC5Q9NY37 505 aa21.62■■□□□ 1.05
SIX3-201ENST00000260653 XRCC1P18887 633 aaPredicted RBP21.61■■□□□ 1.05
SIX3-201ENST00000260653 JAK1P23458 1154 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 PRPH2P23942 346 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 CASP2P42575 452 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 CLCA4Q14CN2 919 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 CACHD1Q5VU97 1274 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 ENPP7Q6UWV6 458 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 GCNT7Q6ZNI0 430 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 SPAG4Q9NPE6 437 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 SERTM1A2A2V5 107 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 FXYD1O00168 92 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 HOXC4P09017 264 aaPredicted RBP21.61■■□□□ 1.05
SIX3-201ENST00000260653 ERGP11308 486 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 BCKDHAP12694 445 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 TCN1P20061 433 aaPredicted RBP21.61■■□□□ 1.05
SIX3-201ENST00000260653 CCNIQ14094 377 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 USP39Q53GS9 565 aaKnown RBP21.61■■□□□ 1.05
SIX3-201ENST00000260653 COQ5Q5HYK3 327 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 PAGE3Q5JUK9 113 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 PRAMEF14Q5SWL7 426 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 PRAMEF13Q5VWM6 474 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 TBC1D21Q8IYX1 336 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 FAM156AQ8NDB6 213 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 OR7G3Q8NG95 312 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 CLHC1Q8NHS4 586 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 ACAT2Q9BWD1 397 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 TMEM45AQ9NWC5 275 aa21.61■■□□□ 1.05
SIX3-201ENST00000260653 PDZK1P1A8MUH7 402 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 EEDO75530 441 aaKnown RBP21.6■■□□□ 1.05
SIX3-201ENST00000260653 CCDC6Q16204 474 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 HIPK4Q8NE63 616 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 SLC5A11Q8WWX8 675 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 CMTM7Q96FZ5 175 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 TOE1Q96GM8 510 aaKnown RBP21.6■■□□□ 1.05
SIX3-201ENST00000260653 HHIPQ96QV1 700 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 OR2M4Q96R27 311 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 FERD3LQ96RJ6 166 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 PRDM8Q9NQV8 689 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 PNMA8BQ9ULN7 279 aaPredicted RBP21.6■■□□□ 1.05
SIX3-201ENST00000260653 PCDHGA11Q9Y5H2 935 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 COL6A3P12111 3177 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 KRBA1A5PL33 1030 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 OR52A4PA6NMU1 304 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 PI15O43692 258 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 LMNAP02545 664 aaKnown RBP21.6■■□□□ 1.05
SIX3-201ENST00000260653 PCNAP12004 261 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 IDSP22304 550 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 YBX1P67809 324 aaKnown RBP21.6■■□□□ 1.05
SIX3-201ENST00000260653 CSTF3Q12996 717 aaKnown RBP21.6■■□□□ 1.05
SIX3-201ENST00000260653 CAPRIN1Q14444 709 aaKnown RBP21.6■■□□□ 1.05
SIX3-201ENST00000260653 SLBPQ14493 270 aaKnown RBP eCLIP21.6■■□□□ 1.05
SIX3-201ENST00000260653 UBXN2BQ14CS0 331 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 RD3Q7Z3Z2 195 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 KRTCAP2Q8N6L1 136 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 WDR92Q96MX6 357 aa21.6■■□□□ 1.05
SIX3-201ENST00000260653 GON4LQ3T8J9 2241 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 MAGEB17A8MXT2 336 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 CHURC1-FNTBB4DL54 471 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 IGLV3-19P01714 112 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 IGHV4-34P06331 123 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 ME2P23368 584 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 SLC7A2P52569 658 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 DGKQP52824 942 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 MEF2AQ02078 507 aaPredicted RBP21.59■■□□□ 1.05
SIX3-201ENST00000260653 MLLT1Q03111 559 aaPredicted RBP21.59■■□□□ 1.05
SIX3-201ENST00000260653 TLR1Q15399 786 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 ATG9BQ674R7 924 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 TSACCQ96A04 125 aaPredicted RBP21.59■■□□□ 1.05
SIX3-201ENST00000260653 APOLD1Q96LR9 279 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 GPATCH1Q9BRR8 931 aaKnown RBP21.59■■□□□ 1.05
SIX3-201ENST00000260653 SPNS1Q9H2V7 528 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 SPATA6Q9NWH7 488 aaPredicted RBP21.59■■□□□ 1.05
SIX3-201ENST00000260653 C10orf142B7Z368 130 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 NPIPB8E9PQR5 432 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 C1GALT1C1LP0DN25 315 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 AMD1P17707 334 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 AKT2P31751 481 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 ZNF33BQ06732 778 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 DNAJC14Q6Y2X3 702 aaPredicted RBP21.59■■□□□ 1.05
SIX3-201ENST00000260653 FRMD1Q8N878 549 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 HUS1BQ8NHY5 278 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 LRRC58Q96CX6 371 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 WDR34Q96EX3 536 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 TMEM181Q9P2C4 612 aa21.59■■□□□ 1.05
SIX3-201ENST00000260653 LEF1Q9UJU2 399 aaPredicted RBP21.59■■□□□ 1.05
SIX3-201ENST00000260653 SH3BGRLO75368 114 aa21.58■■□□□ 1.05
SIX3-201ENST00000260653 ETHE1O95571 254 aa21.58■■□□□ 1.05
SIX3-201ENST00000260653 TACR1P25103 407 aa21.58■■□□□ 1.05
SIX3-201ENST00000260653 MS4A2Q01362 244 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms