RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 C2CD4BA6NLJ0 364 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 OR2AG2A6NM03 316 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 IFNA21P01568 189 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 MT-ND1P03886 318 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 CHRNB2P17787 502 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 CTNNB1P35222 781 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 HSPA7P48741 367 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 SLC9A3P48764 834 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 SMAD3P84022 425 aaKnown RBP4.7□□□□□ -1.66
RC3H1-201ENST00000258349 DSG2Q14126 1118 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 ACSBG2Q5FVE4 666 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 TSTD2Q5T7W7 516 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 ZNF367Q7RTV3 350 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 MCEMP1Q8IX19 187 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 LRRN4Q8WUT4 740 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 AKT1S1Q96B36 256 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 RBM18Q96H35 190 aaKnown RBP4.7□□□□□ -1.66
RC3H1-201ENST00000258349 DUSP26Q9BV47 211 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 TMED9Q9BVK6 235 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 MKS1Q9NXB0 559 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 ABI3Q9P2A4 366 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 COMMD3Q9UBI1 195 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 RNF6Q9Y252 685 aa4.7□□□□□ -1.66
RC3H1-201ENST00000258349 CICQ96RK0 1608 aaPredicted RBP4.7□□□□□ -1.66
RC3H1-201ENST00000258349 FAM149AA5PLN7 773 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 DISC1C4P0D8 188 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 TGFB1I1O43294 461 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 NT5EP21589 574 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 ARL2P36404 184 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 GABARAPL2P60520 117 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 IRF9Q00978 393 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 SLC13A2Q13183 592 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 ENPP2Q13822 863 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 ASTE1Q2TB18 679 aaPredicted RBP4.69□□□□□ -1.66
RC3H1-201ENST00000258349 C10orf62Q5T681 223 aaPredicted RBP4.69□□□□□ -1.66
RC3H1-201ENST00000258349 CAND1Q86VP6 1230 aaKnown RBP4.69□□□□□ -1.66
RC3H1-201ENST00000258349 GHDCQ8N2G8 530 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 YIPF7Q8N8F6 280 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 OR56A1Q8NGH5 318 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 PIWIL1Q96J94 861 aaKnown RBP4.69□□□□□ -1.66
RC3H1-201ENST00000258349 ZFP3Q96NJ6 502 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 PCDHB18PQ96TA0 734 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 POLR2J2Q9GZM3 115 aaKnown RBP4.69□□□□□ -1.66
RC3H1-201ENST00000258349 RNF38Q9H0F5 515 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 MFSD1Q9H3U5 465 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 ABCD2Q9UBJ2 740 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 TLR6Q9Y2C9 796 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 PDLIM1O00151 329 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 RASGRP1O95267 797 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 CYP17A1P05093 508 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 GSTT2P0CG29 244 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 HOXD8P13378 290 aaPredicted RBP4.69□□□□□ -1.66
RC3H1-201ENST00000258349 OR3A3P47888 321 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 OR3A2P47893 321 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 DNAJB13P59910 316 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 GNA12Q03113 381 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 NADK2Q4G0N4 442 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 UBE2Q1Q7Z7E8 422 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 SERPINA9Q86WD7 417 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 SLC37A3Q8NCC5 494 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 OR10G2Q8NGC3 310 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 ERLEC1Q96DZ1 483 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 C5orf34Q96MH7 638 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 PHB2Q99623 299 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 NEUROD4Q9HD90 331 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 HMX1Q9NP08 348 aaPredicted RBP4.69□□□□□ -1.66
RC3H1-201ENST00000258349 PLEKHA6Q9Y2H5 1048 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 MAB21L2Q9Y586 359 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 WASHC1A8K0Z3 465 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 WASH3PC4AMC7 463 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 H1F0P07305 194 aaKnown RBP4.69□□□□□ -1.66
RC3H1-201ENST00000258349 TACR2P21452 398 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 GXYLT1Q4G148 440 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 TMEM214Q6NUQ4 689 aaKnown RBP4.69□□□□□ -1.66
RC3H1-201ENST00000258349 WASH2PQ6VEQ5 465 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 SSX6Q7RTT6 188 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 GPR142Q7Z601 462 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 TMCO2Q7Z6W1 182 aaPredicted RBP4.69□□□□□ -1.66
RC3H1-201ENST00000258349 GID4Q8IVV7 300 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 FANK1Q8TC84 345 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 ZNF514Q96K75 400 aaPredicted RBP4.69□□□□□ -1.66
RC3H1-201ENST00000258349 PWWP2AQ96N64 755 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 XKR8Q9H6D3 395 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 ITM2CQ9NQX7 267 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 CFAP97Q9P2B7 532 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 PHF24Q9UPV7 400 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 DOCK9Q9BZ29 2069 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 TCRBV7S2A1N4TA0A589 114 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 OR6C70A6NIJ9 312 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 ELOA3DA6NLF2 546 aaPredicted RBP4.69□□□□□ -1.66
RC3H1-201ENST00000258349 EI24O14681 340 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 TPST2O60704 377 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 SLITRK5O94991 958 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 PDYNP01213 254 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 RGS19P49795 217 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 MECP2P51608 486 aaKnown RBP4.69□□□□□ -1.66
RC3H1-201ENST00000258349 ILF3Q12906 894 aaKnown RBP eCLIP4.69□□□□□ -1.66
RC3H1-201ENST00000258349 ELOA3BQ3SY89 546 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 RAB11FIP2Q7L804 512 aa4.69□□□□□ -1.66
RC3H1-201ENST00000258349 CCDC28AQ8IWP9 274 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms