RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 CYP4F2P78329 520 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 ABATP80404 500 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 POU4F1Q01851 419 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 PRDX1Q06830 199 aaKnown RBP24.07■■□□□ 1.44
LSM7-201ENST00000252622 CDC20Q12834 499 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 NAB1Q13506 487 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 TSTA3Q13630 321 aaPredicted RBP24.07■■□□□ 1.44
LSM7-201ENST00000252622 PHKG1Q16816 387 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 KBTBD12Q3ZCT8 623 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 ZNF385CQ66K41 422 aaPredicted RBP24.07■■□□□ 1.44
LSM7-201ENST00000252622 FAM199XQ6PEV8 388 aaPredicted RBP24.07■■□□□ 1.44
LSM7-201ENST00000252622 PCSK4Q6UW60 755 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 TMEM207Q6UWW9 146 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 RNF44Q7L0R7 432 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 NKAPQ8N5F7 415 aaKnown RBP24.07■■□□□ 1.44
LSM7-201ENST00000252622 PROKR1Q8TCW9 393 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 ANKRD7Q92527 254 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 DPH7Q9BTV6 452 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 CHST8Q9H2A9 424 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 IRAK4Q9NWZ3 460 aa24.07■■□□□ 1.44
LSM7-201ENST00000252622 NKX2-8O15522 239 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 CTSVO60911 334 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 RECKO95980 971 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 HIST1H2AGP0C0S8 130 aaPredicted RBP24.06■■□□□ 1.44
LSM7-201ENST00000252622 SPTBP11277 2137 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 HIST1H2ADP20671 130 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 GCGRP47871 477 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 AP1S2P56377 157 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 YBX1P67809 324 aaKnown RBP24.06■■□□□ 1.44
LSM7-201ENST00000252622 TCTE1Q5JU00 501 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 RELL1Q8IUW5 271 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 CTAGE3PQ8IX95 158 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 ZNF655Q8N720 491 aaPredicted RBP24.06■■□□□ 1.44
LSM7-201ENST00000252622 FBF1Q8TES7 1133 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 HIST1H2AHQ96KK5 128 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 CATSPER2Q96P56 530 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 GPR22Q99680 433 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 HIST1H2AJQ99878 128 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 SELENOSQ9BQE4 189 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 PLCD4Q9BRC7 762 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 H2AFJQ9BTM1 129 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 TSPYL1Q9H0U9 437 aa24.06■■□□□ 1.44
LSM7-201ENST00000252622 CCDC177Q9NQR7 707 aaPredicted RBP24.06■■□□□ 1.44
LSM7-201ENST00000252622 NOVA2Q9UNW9 492 aaKnown RBP24.06■■□□□ 1.44
LSM7-201ENST00000252622 MTO1Q9Y2Z2 717 aaKnown RBP24.06■■□□□ 1.44
LSM7-201ENST00000252622 PABPN1LA6NDY0 278 aaKnown RBP24.05■■□□□ 1.44
LSM7-201ENST00000252622 SRPX2O60687 465 aaPredicted RBP24.05■■□□□ 1.44
LSM7-201ENST00000252622 KATNA1O75449 491 aa24.05■■□□□ 1.44
LSM7-201ENST00000252622 RAB40ALP0C0E4 278 aa24.05■■□□□ 1.44
LSM7-201ENST00000252622 SLC12A2P55011 1212 aa24.05■■□□□ 1.44
LSM7-201ENST00000252622 TBPL1P62380 186 aa24.05■■□□□ 1.44
LSM7-201ENST00000252622 RPS15P62841 145 aaKnown RBP24.05■■□□□ 1.44
LSM7-201ENST00000252622 ZNF460Q14592 562 aa24.05■■□□□ 1.44
LSM7-201ENST00000252622 TAF1BQ53T94 588 aaPredicted RBP24.05■■□□□ 1.44
LSM7-201ENST00000252622 AGTRAPQ6RW13 159 aa24.05■■□□□ 1.44
LSM7-201ENST00000252622 FAM198BQ6UWH4 519 aa24.05■■□□□ 1.44
LSM7-201ENST00000252622 MBOAT1Q6ZNC8 495 aa24.05■■□□□ 1.44
LSM7-201ENST00000252622 PAQR7Q86WK9 346 aa24.05■■□□□ 1.44
LSM7-201ENST00000252622 CEP97Q8IW35 865 aa24.05■■□□□ 1.44
LSM7-201ENST00000252622 TSPAN17Q96FV3 270 aa24.05■■□□□ 1.44
LSM7-201ENST00000252622 TRIM54Q9BYV2 358 aa24.05■■□□□ 1.44
LSM7-201ENST00000252622 PCBD2Q9H0N5 130 aa24.05■■□□□ 1.44
LSM7-201ENST00000252622 GPAMQ9HCL2 828 aa24.05■■□□□ 1.44
LSM7-201ENST00000252622 UTP6Q9NYH9 597 aaKnown RBP24.05■■□□□ 1.44
LSM7-201ENST00000252622 IGKV1-8A0A0C4DH67 115 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 TK2O00142 265 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 NRP2O60462 931 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 CREG1O75629 220 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 WISP3O95389 354 aaPredicted RBP24.04■■□□□ 1.44
LSM7-201ENST00000252622 AGXTP21549 392 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 PTPN4P29074 926 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 TBR1Q16650 682 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 PTCHD3Q3KNS1 767 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 GRTP1Q5TC63 336 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 THEMIS2Q5TEJ8 643 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 YOD1Q5VVQ6 348 aaPredicted RBP24.04■■□□□ 1.44
LSM7-201ENST00000252622 ZNF425Q6IV72 752 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 LCN10Q6JVE6 187 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 SBSNQ6UWP8 590 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 PPM1NQ8N819 430 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 GBP5Q96PP8 586 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 RUFY1Q96T51 708 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 ZFYVE21Q9BQ24 234 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 NDC1Q9BTX1 674 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 ACTL8Q9H568 366 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 ARL15Q9NXU5 204 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 IKZF3Q9UKT9 509 aa24.04■■□□□ 1.44
LSM7-201ENST00000252622 FITM1A5D6W6 292 aa24.03■■□□□ 1.44
LSM7-201ENST00000252622 PRKAR1AP10644 381 aa24.03■■□□□ 1.44
LSM7-201ENST00000252622 CCND1P24385 295 aa24.03■■□□□ 1.44
LSM7-201ENST00000252622 ECHS1P30084 290 aa24.03■■□□□ 1.44
LSM7-201ENST00000252622 SPRP35270 261 aaPredicted RBP24.03■■□□□ 1.44
LSM7-201ENST00000252622 ARSFP54793 590 aa24.03■■□□□ 1.44
LSM7-201ENST00000252622 RELAQ04206 551 aa24.03■■□□□ 1.44
LSM7-201ENST00000252622 GRM7Q14831 915 aa24.03■■□□□ 1.44
LSM7-201ENST00000252622 PPP1R3AQ16821 1122 aa24.03■■□□□ 1.44
LSM7-201ENST00000252622 PRAMEF13Q5VWM6 474 aa24.03■■□□□ 1.44
LSM7-201ENST00000252622 IFT81Q8WYA0 676 aa24.03■■□□□ 1.44
LSM7-201ENST00000252622 EXTL1Q92935 676 aa24.03■■□□□ 1.44
LSM7-201ENST00000252622 FMO2Q99518 471 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms