RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 RAD51AP1Q96B01 352 aa22.52■■□□□ 1.2
MSX2-201ENST00000239243 WDR34Q96EX3 536 aa22.52■■□□□ 1.2
MSX2-201ENST00000239243 EFCAB11Q9BUY7 163 aa22.52■■□□□ 1.2
MSX2-201ENST00000239243 TEX101Q9BY14 249 aa22.52■■□□□ 1.2
MSX2-201ENST00000239243 ZDHHC5Q9C0B5 715 aa22.52■■□□□ 1.2
MSX2-201ENST00000239243 KCNH6Q9H252 994 aa22.52■■□□□ 1.2
MSX2-201ENST00000239243 EHD1Q9H4M9 534 aa22.52■■□□□ 1.2
MSX2-201ENST00000239243 VAPAQ9P0L0 249 aa22.52■■□□□ 1.2
MSX2-201ENST00000239243 NIPSNAP3AQ9UFN0 247 aaPredicted RBP22.52■■□□□ 1.2
MSX2-201ENST00000239243 SCOCQ9UIL1 159 aa22.52■■□□□ 1.2
MSX2-201ENST00000239243 MAN2B2Q9Y2E5 1009 aa22.52■■□□□ 1.2
MSX2-201ENST00000239243 AKAP10O43572 662 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 FCGR1AP12314 374 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 CYP51A1Q16850 503 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 MED27Q6P2C8 311 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 TMPRSS11BQ86T26 416 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 ITCHQ96J02 903 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 MTERF1Q99551 399 aaKnown RBP22.51■■□□□ 1.19
MSX2-201ENST00000239243 CCDC177Q9NQR7 707 aaPredicted RBP22.51■■□□□ 1.19
MSX2-201ENST00000239243 MAPRE3Q9UPY8 281 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 ASF1AQ9Y294 204 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 GMNNO75496 209 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 NTSR1P30989 418 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 SEC13P55735 322 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 ACSM2AQ08AH3 577 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 DDX39BQ13838 428 aaKnown RBP22.51■■□□□ 1.19
MSX2-201ENST00000239243 ACSM2BQ68CK6 577 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 SYT12Q8IV01 421 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 OR7G3Q8NG95 312 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 WDR26Q9H7D7 661 aa22.51■■□□□ 1.19
MSX2-201ENST00000239243 PI15O43692 258 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 DFNA5O60443 496 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 NPPBP16860 134 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 KELP23276 732 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 TACR1P25103 407 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 HNRNPFP52597 415 aaKnown RBP22.5■■□□□ 1.19
MSX2-201ENST00000239243 RPS21P63220 83 aaKnown RBP22.5■■□□□ 1.19
MSX2-201ENST00000239243 FOLH1Q04609 750 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 DLX2Q07687 328 aaPredicted RBP22.5■■□□□ 1.19
MSX2-201ENST00000239243 C2orf27AQ580R0 203 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 MTX3Q5HYI7 312 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 ATG9BQ674R7 924 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 FAM83HQ6ZRV2 1179 aaPredicted RBP22.5■■□□□ 1.19
MSX2-201ENST00000239243 GPR180Q86V85 440 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 DCUN1D3Q8IWE4 304 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 RIMKLAQ8IXN7 391 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 ADGRG5Q8IZF4 528 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 SETD7Q8WTS6 366 aaKnown RBP22.5■■□□□ 1.19
MSX2-201ENST00000239243 SERGEFQ9UGK8 458 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 NEUROG3Q9Y4Z2 214 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 TRPM6Q9BX84 2022 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 KMOO15229 486 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 MTHFD1P11586 935 aaKnown RBP22.5■■□□□ 1.19
MSX2-201ENST00000239243 BMP2P12643 396 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 PLIN5Q00G26 463 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 TAP2Q03519 686 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 CYP4F3Q08477 520 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 LRIF1Q5T3J3 769 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 NSMCE2Q96MF7 247 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 HHIPQ96QV1 700 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 GABRG3Q99928 467 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 THUMPD3Q9BV44 507 aaKnown RBP22.5■■□□□ 1.19
MSX2-201ENST00000239243 SEMA6AQ9H2E6 1030 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 ANAPC2Q9UJX6 822 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 CEP290O15078 2479 aa22.5■■□□□ 1.19
MSX2-201ENST00000239243 MYO9BQ13459 2157 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 A0A096LPI6 279 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 TCRBV5S2A0A599 114 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 DENRO43583 198 aaKnown RBP22.49■■□□□ 1.19
MSX2-201ENST00000239243 TIPRLO75663 272 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 FASP25445 335 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 TRIM23P36406 574 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 SRSF11Q05519 484 aaKnown RBP22.49■■□□□ 1.19
MSX2-201ENST00000239243 LAPTM5Q13571 262 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 SELPLGQ14242 412 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 HIST2H2ACQ16777 129 aaPredicted RBP22.49■■□□□ 1.19
MSX2-201ENST00000239243 SPIN4Q56A73 249 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 RUNDC3AQ59EK9 446 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 HIST2H2AA3Q6FI13 130 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 GLYATQ6IB77 296 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 KIAA1161Q6NSJ0 714 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 TMEM154Q6P9G4 183 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 EP400NLQ6ZTU2 488 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 RALGPS2Q86X27 583 aaPredicted RBP22.49■■□□□ 1.19
MSX2-201ENST00000239243 TMEM132CQ8N3T6 1108 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 ANKFN1Q8N957 763 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 TRPV3Q8NET8 790 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 CCDC115Q96NT0 180 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 NECTIN4Q96NY8 510 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 LGR4Q9BXB1 951 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 PHPT1Q9NRX4 125 aaPredicted RBP22.49■■□□□ 1.19
MSX2-201ENST00000239243 CLDND1Q9NY35 253 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 PRKAB1Q9Y478 270 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 TICRRQ7Z2Z1 1910 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 TXNDC9O14530 226 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 DNTTP04053 509 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 C1GALT1C1LP0DN25 315 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 PCNAP12004 261 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 NCK1P16333 377 aa22.49■■□□□ 1.19
MSX2-201ENST00000239243 OR4D2P58180 307 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms