RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 LRRN4Q8WUT4 740 aa7.05□□□□□ -1.28
CPS1-201ENST00000233072 FAM83CQ9BQN1 747 aa7.05□□□□□ -1.28
CPS1-201ENST00000233072 MCCC2Q9HCC0 563 aa7.05□□□□□ -1.28
CPS1-201ENST00000233072 DGKBQ9Y6T7 804 aa7.05□□□□□ -1.28
CPS1-201ENST00000233072 E7ENX8 843 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 NPIPA5E9PKD4 350 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 HAS3O00219 553 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 ECI2O75521 394 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 KAT7O95251 611 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 HSD11B1P28845 292 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 ADAM8P78325 824 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 PCDH1Q08174 1060 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 MERTKQ12866 999 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 GPM6BQ13491 265 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 PUM1Q14671 1186 aaKnown RBP eCLIP7.04□□□□□ -1.28
CPS1-201ENST00000233072 DECR1Q16698 335 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 SOWAHAQ2M3V2 549 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 EGFLAMQ63HQ2 1017 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 SLC36A4Q6YBV0 504 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 SLC51AQ86UW1 340 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 THOC6Q86W42 341 aaKnown RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 IFNL1Q8IU54 200 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 PYROXD2Q8N2H3 581 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 C1orf216Q8TAB5 229 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 TSPEARQ8WU66 669 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 RDH12Q96NR8 316 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 RANBP9Q96S59 729 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 PELOQ9BRX2 385 aaKnown RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 FGFBP2Q9BYJ0 223 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 TBL1XR1Q9BZK7 514 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 Q9N2J8 555 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 PACSIN3Q9UKS6 424 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 FZD4Q9ULV1 537 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 NPIPA1Q9UND3 350 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 RIPK3Q9Y572 518 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 PCDHGC4Q9Y5F7 938 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 PCDHGA3Q9Y5H0 932 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 U3KQV3 271 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 PRAMEF33A0A0G2JMD5 474 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 PRAMEF10O60809 474 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 NOS1APO75052 506 aaPredicted RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 APOL3O95236 402 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 H6PDO95479 791 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 H1F0P07305 194 aaKnown RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 HAPLN1P10915 354 aaPredicted RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 PVALBP20472 110 aaPredicted RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 SP100P23497 879 aaPredicted RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 DGKZQ13574 1117 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 BLMHQ13867 455 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 MINDY4Q4G0A6 757 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 LRRC20Q8TCA0 184 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 GTPBP3Q969Y2 492 aaKnown RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 C1orf74Q96LT6 269 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 TSGA13Q96PP4 275 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 ZNF717Q9BY31 904 aaPredicted RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 POLR2J3Q9H1A7 115 aaKnown RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 DPEP2Q9H4A9 486 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 PLCL2Q9UPR0 1127 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 COL2A1P02458 1487 aaPredicted RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 ZNF142P52746 1687 aaPredicted RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 KANTRA0A1W2PQU2 76 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 FAM172BPA6NC97 362 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 FABP12A6NFH5 140 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 hCG_2039718K7EN88 272 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 ARL6IP5O75915 188 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 PGAM2P15259 253 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 ITGA3P26006 1051 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 ARHGAP1Q07960 439 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 SLC10A7Q0GE19 358 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 ST3GAL3Q11203 375 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 IDNKQ5T6J7 187 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 PM20D2Q8IYS1 436 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 DCAF4L2Q8NA75 395 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 OR2AP1Q8NGE2 309 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 PIGKQ92643 395 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 FAM84AQ96KN4 292 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 ZNF641Q96N77 438 aaPredicted RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 NDC1Q9BTX1 674 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 CADM1Q9BY67 442 aaKnown RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 UCK2Q9BZX2 261 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 ZNF224Q9NZL3 707 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 COL20A1Q9P218 1284 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 LTBP3Q9NS15 1303 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 CACNA1FO60840 1977 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 EFCAB9A8MZ26 197 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 NPC1O15118 1278 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 TP73O15350 636 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 NUAK1O60285 661 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 HCN1O60741 890 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 SOCS5O75159 536 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 RAB36O95755 333 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 HOXC8P31273 242 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 GALNT2Q10471 571 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 TIGD6Q17RP2 521 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 CRTC2Q53ET0 693 aaPredicted RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 UBAP2Q5T6F2 1119 aaKnown RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 FRG2Q64ET8 278 aa7.04□□□□□ -1.28
CPS1-201ENST00000233072 PRSS55Q6UWB4 352 aaPredicted RBP7.04□□□□□ -1.28
CPS1-201ENST00000233072 P4HA3Q7Z4N8 544 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms