RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 PCDHGA7Q9Y5G6 932 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 CLCA3PQ9Y6N3 262 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 KAT6AQ92794 2004 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 TLR5O60602 858 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 HSD17B1P14061 328 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 WEE1P30291 646 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 ARFIP1P53367 373 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 CCSAPQ6IQ19 270 aaPredicted RBP13.48□□□□□ -0.25
HCFC2-201ENST00000229330 RNASE11Q8TAA1 199 aaKnown RBP13.48□□□□□ -0.25
HCFC2-201ENST00000229330 GEMIN6Q8WXD5 167 aaKnown RBP13.48□□□□□ -0.25
HCFC2-201ENST00000229330 TWNKQ96RR1 684 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 FUZQ9BT04 418 aa13.48□□□□□ -0.25
HCFC2-201ENST00000229330 ELAC1Q9H777 363 aaKnown RBP13.48□□□□□ -0.25
HCFC2-201ENST00000229330 PPIEQ9UNP9 301 aaKnown RBP13.48□□□□□ -0.25
HCFC2-201ENST00000229330 METTL21EPA6NDL7 271 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 IQCF5A8MTL0 148 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 MSCO60682 206 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 SAGP10523 405 aaPredicted RBP13.47□□□□□ -0.25
HCFC2-201ENST00000229330 NFKB2Q00653 900 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 NAE1Q13564 534 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 OR4F3Q6IEY1 312 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 ANKRD26P1Q6NSI1 321 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 SLC30A8Q8IWU4 369 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 PIAS4Q8N2W9 510 aaPredicted RBP13.47□□□□□ -0.25
HCFC2-201ENST00000229330 OR8J3Q8NGG0 315 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 LMAN2LQ9H0V9 348 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 ENAMQ9NRM1 1142 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 CUEDC1Q9NWM3 386 aaPredicted RBP13.47□□□□□ -0.25
HCFC2-201ENST00000229330 HPF1Q9NWY4 346 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 FKBP7Q9Y680 259 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 KIAA0513O60268 411 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 ANXA3P12429 323 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 GK3PQ14409 553 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 TAF1AQ15573 450 aaPredicted RBP13.47□□□□□ -0.25
HCFC2-201ENST00000229330 DESI1Q6ICB0 168 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 Q6ZNX1 250 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 MOCOSQ96EN8 888 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 SYT17Q9BSW7 474 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 MS4A12Q9NXJ0 267 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 DAPL1A0PJW8 107 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 SERPINA3P01011 423 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 RGS8P57771 180 aaPredicted RBP13.47□□□□□ -0.25
HCFC2-201ENST00000229330 EFR3AQ14156 821 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 PAFAH1B3Q15102 231 aaKnown RBP13.47□□□□□ -0.25
HCFC2-201ENST00000229330 PTGES3Q15185 160 aaKnown RBP13.47□□□□□ -0.25
HCFC2-201ENST00000229330 NAPRTQ6XQN6 538 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 CHERPQ8IWX8 916 aaKnown RBP13.47□□□□□ -0.25
HCFC2-201ENST00000229330 CHPT1Q8WUD6 406 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 ENPP5Q9UJA9 477 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 RIMS3Q9UJD0 308 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 TOPAZ1Q8N9V7 1692 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 SLIT2O94813 1529 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 TRAV6A0A075B6T7 132 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 PDCD5O14737 125 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 HLA-DQB2P05538 268 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 PRKACAP17612 351 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 F8A1P23610 371 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 HCAR3P49019 387 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 DUOXA1Q1HG43 343 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 CRB2Q5IJ48 1285 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 ZNF311Q5JNZ3 666 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 SPANXN4Q5MJ08 99 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 LRRC66Q68CR7 880 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 SERPINA9Q86WD7 417 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 GHDCQ8N2G8 530 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 GRIN3AQ8TCU5 1115 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 FCRL3Q96P31 734 aaPredicted RBP13.47□□□□□ -0.25
HCFC2-201ENST00000229330 TMED9Q9BVK6 235 aa13.47□□□□□ -0.25
HCFC2-201ENST00000229330 OPN1SWP03999 348 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 MMP3P08254 477 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 CD52P31358 61 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 IL10RBQ08334 325 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 MED27Q6P2C8 311 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 C2CD4AQ8NCU7 369 aaPredicted RBP13.46□□□□□ -0.25
HCFC2-201ENST00000229330 OR13C4Q8NGS5 318 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 SMG7Q92540 1137 aaKnown RBP13.46□□□□□ -0.25
HCFC2-201ENST00000229330 KAT2AQ92830 837 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 PSMG2Q969U7 264 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 PCDHGB6Q9Y5F9 930 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 NUDT14O95848 222 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 ZNHIT3Q15649 155 aaPredicted RBP13.46□□□□□ -0.25
HCFC2-201ENST00000229330 METTL3Q86U44 580 aaKnown RBP13.46□□□□□ -0.25
HCFC2-201ENST00000229330 TIGD4Q8IY51 512 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 NDNFQ8TB73 568 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 AP2M1Q96CW1 435 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 MAELQ96JY0 434 aaKnown RBP13.46□□□□□ -0.25
HCFC2-201ENST00000229330 UCK2Q9BZX2 261 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 HSPE1-MOB4S4R3N1 261 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 COL1A2P08123 1366 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 SMIM30A4D0T7 59 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 CPSF4LA6NMK7 179 aaKnown RBP13.46□□□□□ -0.25
HCFC2-201ENST00000229330 YJEFN3A6XGL0 299 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 PAPSS2O95340 614 aaPredicted RBP13.46□□□□□ -0.25
HCFC2-201ENST00000229330 CKBP12277 381 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 GGT5P36269 586 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 SPAM1P38567 509 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 NIPAL4Q0D2K0 466 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 SLC10A6Q3KNW5 377 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 C9orf64Q5T6V5 341 aa13.46□□□□□ -0.25
HCFC2-201ENST00000229330 ZFP90Q8TF47 636 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms