RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 ZNF304Q9HCX3 659 aa11.03□□□□□ -0.64
FRG1-201ENST00000226798 PIH1D1Q9NWS0 290 aaKnown RBP11.03□□□□□ -0.64
FRG1-201ENST00000226798 PLA2G3Q9NZ20 509 aa11.03□□□□□ -0.64
FRG1-201ENST00000226798 PTGFRNQ9P2B2 879 aa11.03□□□□□ -0.64
FRG1-201ENST00000226798 ZNF282Q9UDV7 671 aaPredicted RBP11.03□□□□□ -0.64
FRG1-201ENST00000226798 SCN2AQ99250 2005 aa11.02□□□□□ -0.64
FRG1-201ENST00000226798 SPG11Q96JI7 2443 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 IGHV1-45A0A0A0MS14 117 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 HYKKA2RU49 373 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 CCL21O00585 134 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 NRP2O60462 931 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 SLCO2B1O94956 709 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 BMP10O95393 424 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 TPM1P09493 284 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 COX6B1P14854 86 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 CTNNA2P26232 953 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 PSMB5P28074 263 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 OCA2Q04671 838 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 HSPA14Q0VDF9 509 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 VWA2Q5GFL6 755 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 TMEM207Q6UWW9 146 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 RIPOR1Q6ZS17 1223 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 ARHGEF18Q6ZSZ5 1173 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 RNF44Q7L0R7 432 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 PRSS58Q8IYP2 241 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 ZNF295-AS1Q8N0V1 137 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 SIRT6Q8N6T7 355 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 HMGCLL1Q8TB92 370 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 ASZ1Q8WWH4 475 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 RAB11FIP5Q9BXF6 653 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 TFR2Q9UP52 801 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 PCDHA3Q9Y5H8 950 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 FAM169AQ9Y6X4 670 aa11.02□□□□□ -0.65
FRG1-201ENST00000226798 LOC105369274A0A096LPK9 316 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 LOC102723532A0A0G2JNH3 316 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 IDSB3KWA1 339 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 F8W8V4 182 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 CBFA2T2O43439 604 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 WDPCPO95876 746 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 F10P00742 488 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 CRYABP02511 175 aaKnown RBP11.01□□□□□ -0.65
FRG1-201ENST00000226798 CELA2AP08217 269 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 SNRPB2P08579 225 aaKnown RBP11.01□□□□□ -0.65
FRG1-201ENST00000226798 FBLP22087 321 aaKnown RBP11.01□□□□□ -0.65
FRG1-201ENST00000226798 MAGEA1P43355 309 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 ADORA2A-AS1P86434 159 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 ACVR1Q04771 509 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 EEF1A2Q05639 463 aaKnown RBP11.01□□□□□ -0.65
FRG1-201ENST00000226798 SEMA3AQ14563 771 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 TESK1Q15569 626 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 MUM1Q2TAK8 710 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 PRTGQ2VWP7 1150 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 P3H1Q32P28 736 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 CCDC38Q502W7 563 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 AADACL2Q6P093 401 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 CNSTQ6PJW8 725 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 AFTPHQ6ULP2 937 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 ZNF534Q76KX8 674 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 CNGA4Q8IV77 575 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 OR4N4Q8N0Y3 316 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 FAM71DQ8N9W8 422 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 OR2L3Q8NG85 312 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 DNAJB8Q8NHS0 232 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 CFAP61Q8NHU2 1237 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 ALS2CR12Q96Q35 445 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 CARD6Q9BX69 1037 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 RIC8BQ9NVN3 520 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 SEC14L3Q9UDX4 400 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 SLC39A10Q9ULF5 831 aa11.01□□□□□ -0.65
FRG1-201ENST00000226798 LOC102723996A0A087X1L8 192 aa11□□□□□ -0.65
FRG1-201ENST00000226798 A0A0J9YVX5 310 aa11□□□□□ -0.65
FRG1-201ENST00000226798 A0A1W2PPV9 198 aa11□□□□□ -0.65
FRG1-201ENST00000226798 OR2A25A4D2G3 310 aa11□□□□□ -0.65
FRG1-201ENST00000226798 KRT87PA6NCN2 255 aa11□□□□□ -0.65
FRG1-201ENST00000226798 IQCF5A8MTL0 148 aa11□□□□□ -0.65
FRG1-201ENST00000226798 TJP3O95049 919 aa11□□□□□ -0.65
FRG1-201ENST00000226798 RASAL1O95294 804 aa11□□□□□ -0.65
FRG1-201ENST00000226798 GOT2P00505 430 aaKnown RBP11□□□□□ -0.65
FRG1-201ENST00000226798 APOA4P06727 396 aa11□□□□□ -0.65
FRG1-201ENST00000226798 AGAP20933 346 aa11□□□□□ -0.65
FRG1-201ENST00000226798 AOAHP28039 575 aa11□□□□□ -0.65
FRG1-201ENST00000226798 EFNA3P52797 238 aa11□□□□□ -0.65
FRG1-201ENST00000226798 GDF10P55107 478 aa11□□□□□ -0.65
FRG1-201ENST00000226798 SRSF11Q05519 484 aaKnown RBP11□□□□□ -0.65
FRG1-201ENST00000226798 PCOLCEQ15113 449 aa11□□□□□ -0.65
FRG1-201ENST00000226798 HIBCHQ6NVY1 386 aaPredicted RBP11□□□□□ -0.65
FRG1-201ENST00000226798 XKRXQ6PP77 449 aa11□□□□□ -0.65
FRG1-201ENST00000226798 OR2A1Q8NGT9 310 aa11□□□□□ -0.65
FRG1-201ENST00000226798 ALG3Q92685 438 aa11□□□□□ -0.65
FRG1-201ENST00000226798 HDAC10Q969S8 669 aa11□□□□□ -0.65
FRG1-201ENST00000226798 MVB12AQ96EY5 273 aa11□□□□□ -0.65
FRG1-201ENST00000226798 MIPEPQ99797 713 aa11□□□□□ -0.65
FRG1-201ENST00000226798 TSSK1BQ9BXA7 367 aa11□□□□□ -0.65
FRG1-201ENST00000226798 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11□□□□□ -0.65
FRG1-201ENST00000226798 SYNPO2LQ9H987 977 aa11□□□□□ -0.65
FRG1-201ENST00000226798 C14orf105Q9NVL8 296 aa11□□□□□ -0.65
FRG1-201ENST00000226798 STOX2Q9P2F5 926 aaPredicted RBP11□□□□□ -0.65
FRG1-201ENST00000226798 SLC2A6Q9UGQ3 507 aa11□□□□□ -0.65
FRG1-201ENST00000226798 ZC3H7BQ9UGR2 993 aaKnown RBP11□□□□□ -0.65
FRG1-201ENST00000226798 RIMKLBQ9ULI2 386 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms