RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 CLK1P49759 484 aaKnown RBP12.05□□□□□ -0.48
NUP88-201ENST00000225696 NUDT6P53370 316 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 CLDN8P56748 225 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 DSC1Q08554 894 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 ABHD18Q0P651 414 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 CDC20Q12834 499 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 NPRL3Q12980 569 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 MAD2L1Q13257 205 aaPredicted RBP12.05□□□□□ -0.48
NUP88-201ENST00000225696 ZNF404Q494X3 552 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 C5orf22Q49AR2 442 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 IQCCQ4KMZ1 466 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 RNF219Q5W0B1 726 aaPredicted RBP12.05□□□□□ -0.48
NUP88-201ENST00000225696 PDE12Q6L8Q7 609 aaKnown RBP12.05□□□□□ -0.48
NUP88-201ENST00000225696 PTOV1Q86YD1 416 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 NLGN4XQ8N0W4 816 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 TMEM132CQ8N3T6 1108 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 KIAA1958Q8N8K9 716 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 HSH2DQ96JZ2 352 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 KCNC2Q96PR1 638 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 APOL4Q9BPW4 351 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 NTMT1Q9BV86 223 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 CDADC1Q9BWV3 514 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 EBPLQ9BY08 206 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 GPR63Q9BZJ6 419 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 CLPBQ9H078 707 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 MARCH7Q9H992 704 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 OLA1Q9NTK5 396 aaKnown RBP12.05□□□□□ -0.48
NUP88-201ENST00000225696 SLC6A14Q9UN76 642 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 RNF6Q9Y252 685 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 FCF1Q9Y324 198 aaKnown RBP12.05□□□□□ -0.48
NUP88-201ENST00000225696 PCDHGA6Q9Y5G7 932 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 CLDN24A6NM45 220 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 K7ERQ8 282 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 SNPHO15079 494 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 PRAMEF4O60810 478 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 RFPL2O75678 378 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 CCNDBP1O95273 360 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 FABP3P05413 133 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 RHOCP08134 193 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 EPB42P16452 691 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 PCYT1AP49585 367 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 FKBP1BP68106 108 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 FADDQ13158 208 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 DOC2BQ14184 412 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 PLEKHG6Q3KR16 790 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 UBE2UQ5VVX9 321 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 PRAMEF9Q5VWM5 478 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 CCDC103Q8IW40 242 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 ZZZ3Q8IYH5 903 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 SVOPQ8N4V2 548 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 BEND7Q8N7W2 519 aaPredicted RBP12.05□□□□□ -0.48
NUP88-201ENST00000225696 SLC38A4Q969I6 547 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 ITPAQ9BY32 194 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 HOXD1Q9GZZ0 328 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 LATS2Q9NRM7 1088 aa12.05□□□□□ -0.48
NUP88-201ENST00000225696 THUMPD1Q9NXG2 353 aaKnown RBP12.05□□□□□ -0.48
NUP88-201ENST00000225696 MBD1Q9UIS9 605 aaPredicted RBP12.05□□□□□ -0.48
NUP88-201ENST00000225696 LOC100506127A0A0U1RQW1 187 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 MTMR11A4FU01 709 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 FKBP9O95302 570 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 ADRA2AP08913 450 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 EBLN1P0CF75 366 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 COL6A1P12109 1028 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 ENGP17813 658 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 FPR1P21462 350 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 MZF1P28698 734 aaPredicted RBP12.04□□□□□ -0.48
NUP88-201ENST00000225696 AQP1P29972 269 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 KDELR2P33947 212 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 HMGCLP35914 325 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 PPP3CCP48454 512 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 CDH4P55283 916 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 MTA1Q13330 715 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 CAMK2GQ13555 558 aaPredicted RBP12.04□□□□□ -0.48
NUP88-201ENST00000225696 PROX2Q3B8N5 592 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 GPRC6AQ5T6X5 926 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 NCEH1Q6PIU2 408 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 TSEN54Q7Z6J9 526 aaKnown RBP12.04□□□□□ -0.48
NUP88-201ENST00000225696 AKAP14Q86UN6 197 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 SYTL1Q8IYJ3 562 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 CLECL1Q8IZS7 167 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 PARP16Q8N5Y8 322 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 CELF2-AS1Q8N7Q2 184 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 CAPSLQ8WWF8 208 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 TXNDC15Q96J42 360 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 TPD52L3Q96J77 140 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 APOLD1Q96LR9 279 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 COPS4Q9BT78 406 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 OR51E2Q9H255 320 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 ASB8Q9H765 288 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 CPNE5Q9HCH3 593 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 IL26Q9NPH9 171 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 TRMT13Q9NUP7 481 aaKnown RBP12.04□□□□□ -0.48
NUP88-201ENST00000225696 ASIC5Q9NY37 505 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 TAS2R16Q9NYV7 291 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 KIF17Q9P2E2 1029 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 KLHL3Q9UH77 587 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 AFF4Q9UHB7 1163 aaKnown RBP12.04□□□□□ -0.48
NUP88-201ENST00000225696 ITGB1BP2Q9UKP3 347 aa12.04□□□□□ -0.48
NUP88-201ENST00000225696 SAMD4AQ9UPU9 718 aaKnown RBP12.04□□□□□ -0.48
NUP88-201ENST00000225696 A0A1W2PQ67 120 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms