RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 ASF1BQ9NVP2 202 aa14.36□□□□□ -0.11
UPK3A-201ENST00000216211 PLEKHB1Q9UF11 243 aaPredicted RBP14.36□□□□□ -0.11
UPK3A-201ENST00000216211 FBXL4Q9UKA2 621 aa14.36□□□□□ -0.11
UPK3A-201ENST00000216211 TCRBV7S3A2A0A539 114 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 TARM1B6A8C7 271 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 AP3B1O00203 1094 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 PGRMC1O00264 195 aaKnown RBP14.35□□□□□ -0.11
UPK3A-201ENST00000216211 SOCS6O14544 535 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 NRP2O60462 931 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 KLHL41O60662 606 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 NIPSNAP2O75323 286 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 IPO13O94829 963 aaKnown RBP14.35□□□□□ -0.11
UPK3A-201ENST00000216211 FKBP9O95302 570 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 MED26O95402 600 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 ONECUT2O95948 504 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 ALBP02768 609 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 MMP11P24347 488 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 OR1D4P47884 311 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 SOX8P57073 446 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 AIMP2Q13155 320 aaKnown RBP14.35□□□□□ -0.11
UPK3A-201ENST00000216211 C4orf17Q53FE4 359 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 GLE1Q53GS7 698 aaKnown RBP14.35□□□□□ -0.11
UPK3A-201ENST00000216211 ZADH2Q8N4Q0 377 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 RAB42Q8N4Z0 105 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 OR2L3Q8NG85 312 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 FOPNLQ96NB1 174 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 KIFC1Q9BW19 673 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 SLC26A1Q9H2B4 701 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 WDR54Q9H977 334 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 MRM3Q9HC36 420 aaKnown RBP14.35□□□□□ -0.11
UPK3A-201ENST00000216211 CTSFQ9UBX1 484 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 MAU2Q9Y6X3 613 aa14.35□□□□□ -0.11
UPK3A-201ENST00000216211 A0A0J9YVX5 310 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 A0A1W2PPV9 198 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 FITM1A5D6W6 292 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 RHOXF2BP0C7M4 288 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 TPSB2P20231 275 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 CCNFP41002 786 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 GLRBP48167 497 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 YBX1P67809 324 aaKnown RBP14.34□□□□□ -0.11
UPK3A-201ENST00000216211 FASTKQ14296 549 aaKnown RBP14.34□□□□□ -0.11
UPK3A-201ENST00000216211 TRIP13Q15645 432 aaPredicted RBP14.34□□□□□ -0.11
UPK3A-201ENST00000216211 TPSAB1Q15661 275 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 FAM214AQ32MH5 1076 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 WASHC2DQ5SRD0 308 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 YOD1Q5VVQ6 348 aaPredicted RBP14.34□□□□□ -0.11
UPK3A-201ENST00000216211 PRAMEF13Q5VWM6 474 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 MRNIPQ6NTE8 343 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 WDR93Q6P2C0 686 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 LRRC8BQ6P9F7 803 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 SDCCAG8Q86SQ7 713 aaPredicted RBP14.34□□□□□ -0.11
UPK3A-201ENST00000216211 OR2A1Q8NGT9 310 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 MAIP1Q8WWC4 291 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 TM9SF4Q92544 642 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 LPGAT1Q92604 370 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 NAP1L3Q99457 506 aaPredicted RBP14.34□□□□□ -0.11
UPK3A-201ENST00000216211 RHOXF2Q9BQY4 288 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 ENAMQ9NRM1 1142 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 ARGLU1Q9NWB6 273 aaPredicted RBP14.34□□□□□ -0.11
UPK3A-201ENST00000216211 GALPQ9UBC7 116 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 ZC3H7BQ9UGR2 993 aaKnown RBP14.34□□□□□ -0.11
UPK3A-201ENST00000216211 SOX13Q9UN79 622 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 CRYL1Q9Y2S2 319 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 CSAG2Q9Y5P2 127 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 HS3ST3B1Q9Y662 390 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 FAM169AQ9Y6X4 670 aa14.34□□□□□ -0.11
UPK3A-201ENST00000216211 TEX15Q9BXT5 2789 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 LOC105369274A0A096LPK9 316 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 LOC102723532A0A0G2JNH3 316 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 A1L4Q6 167 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 HYKKA2RU49 373 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 CCDC188H7C350 402 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 SRPX2O60687 465 aaPredicted RBP14.33□□□□□ -0.12
UPK3A-201ENST00000216211 AVILO75366 819 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 MATN4O95460 622 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 EIF2S1P05198 315 aaKnown RBP14.33□□□□□ -0.12
UPK3A-201ENST00000216211 GBX1Q14549 363 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 RBBP7Q16576 425 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 HIF1AQ16665 826 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 TYSND1Q2T9J0 566 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 CRB2Q5IJ48 1285 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 KIRREL2Q6UWL6 708 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 Q6ZS92 163 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 RNF44Q7L0R7 432 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 MTERF4Q7Z6M4 381 aaKnown RBP14.33□□□□□ -0.12
UPK3A-201ENST00000216211 CUZD1Q86UP6 607 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 PARP9Q8IXQ6 854 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 OR4N4Q8N0Y3 316 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 HMGCLL1Q8TB92 370 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 MAGEC3Q8TD91 643 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 NACC2Q96BF6 587 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 ACAT2Q9BWD1 397 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 ZNF304Q9HCX3 659 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 CUEDC1Q9NWM3 386 aaPredicted RBP14.33□□□□□ -0.12
UPK3A-201ENST00000216211 IL1RAPL1Q9NZN1 696 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 SPATA7Q9P0W8 599 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 STOX2Q9P2F5 926 aaPredicted RBP14.33□□□□□ -0.12
UPK3A-201ENST00000216211 KLK4Q9Y5K2 254 aa14.33□□□□□ -0.12
UPK3A-201ENST00000216211 VSTM2BA6NLU5 285 aa14.32□□□□□ -0.12
UPK3A-201ENST00000216211 CBX6O95503 412 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms