RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 ARF1P84077 181 aaKnown RBP13.29□□□□□ -0.28
TGFBR3-201ENST00000212355 KCNC4Q03721 635 aa13.29□□□□□ -0.28
TGFBR3-201ENST00000212355 RAB6CQ53S08 254 aa13.29□□□□□ -0.28
TGFBR3-201ENST00000212355 USP43Q70EL4 1123 aa13.29□□□□□ -0.28
TGFBR3-201ENST00000212355 SYNPOQ8N3V7 929 aa13.29□□□□□ -0.28
TGFBR3-201ENST00000212355 PROKR2Q8NFJ6 384 aa13.29□□□□□ -0.28
TGFBR3-201ENST00000212355 RAB6CQ9H0N0 254 aa13.29□□□□□ -0.28
TGFBR3-201ENST00000212355 KCNN2Q9H2S1 579 aa13.29□□□□□ -0.28
TGFBR3-201ENST00000212355 CNTN3Q9P232 1028 aa13.29□□□□□ -0.28
TGFBR3-201ENST00000212355 KCNK6Q9Y257 313 aa13.29□□□□□ -0.28
TGFBR3-201ENST00000212355 WNT6Q9Y6F9 365 aa13.29□□□□□ -0.28
TGFBR3-201ENST00000212355 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 FAM234BA2RU67 622 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 CCRL2O00421 344 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 CSF2P04141 144 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 PRNPP04156 253 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 RB1P06400 928 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 IMPDH1P20839 514 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 PHC1P78364 1004 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 BICRALQ6AI39 1079 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 CHADLQ6NUI6 762 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 MARCH9Q86YJ5 346 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 KRTCAP2Q8N6L1 136 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 IRF2BPLQ9H1B7 796 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 PLK4O00444 970 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 ERI3O43414 337 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 B4GALT2O60909 372 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 PTGER3P43115 390 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 RPS13P62277 151 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 SLC25A11Q02978 314 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 ILF2Q12905 390 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 DPYSL2Q16555 572 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 IQCCQ4KMZ1 466 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 SWT1Q5T5J6 900 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 ZNF557Q8N988 423 aaPredicted RBP13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 IRGQQ8WZA9 623 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 AURKBQ96GD4 344 aaPredicted RBP13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 COMMD4Q9H0A8 199 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 KAT8Q9H7Z6 458 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 TRAV6A0A075B6T7 132 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 LOC100130705A0A1B0GUX0 176 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 CPED1A4D0V7 1026 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 AOC2O75106 756 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 CYP11A1P05108 521 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 LAG3P18627 525 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 CCNOP22674 350 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 S100GP29377 79 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 GRK6P43250 576 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 CLCNKAP51800 687 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 ZNF782Q6ZMW2 699 aaPredicted RBP13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 PEX5LQ8IYB4 626 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 GAL3ST3Q96A11 431 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 WACQ9BTA9 647 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 CST11Q9H112 138 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 SEC61A2Q9H9S3 476 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 MARK1Q9P0L2 795 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 MYH6P13533 1939 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 ZNF806P0C7X5 589 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 NSG1P42857 185 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 KCNJ11Q14654 390 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 PRPF38BQ5VTL8 546 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 METTL3Q86U44 580 aaKnown RBP13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 CMTM8Q8IZV2 173 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 KREMEN2Q8NCW0 462 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 GALNT11Q8NCW6 608 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 THEM6Q8WUY1 208 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 RAB8BQ92930 207 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 TIFAQ96CG3 184 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 DMAC2Q9NW81 257 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 GPR89AB7ZAQ6 455 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 C6orf47O95873 294 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 GPR89BP0CG08 455 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 CKMT1AP12532 417 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 ZNF823P16415 610 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 ZNF234Q14588 700 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 AMZ2Q86W34 360 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 SVOPLQ8N434 492 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 FBXL18Q96ME1 805 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 HPF1Q9NWY4 346 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 VNN3Q9NY84 501 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 DNAJB9Q9UBS3 223 aa13.28□□□□□ -0.28
TGFBR3-201ENST00000212355 SORBS2O94875 1100 aaKnown RBP13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 PCBP1Q15365 356 aaKnown RBP eCLIP13.27□□□□□ -0.283e-6■□□□□ 9.7
TGFBR3-201ENST00000212355 OR4K1Q8NGD4 311 aa13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 PLEKHO2Q8TD55 490 aa13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 MRIQ9BWK5 157 aa13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 GNG8Q9UK08 70 aa13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 UTS2RQ9UKP6 389 aa13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 ATXN7L1Q9ULK2 861 aaPredicted RBP13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 ERVK-11Q9UQG0 969 aa13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 ZNF451Q9Y4E5 1061 aa13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 TLR4O00206 839 aa13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 ZNF208O43345 1280 aa13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 CDRT1O95170 752 aa13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 SLC2A2P11168 524 aaPredicted RBP13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 TYRP1P17643 537 aa13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 PRDX6P30041 224 aa13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 HEPACAMQ14CZ8 416 aa13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 DNAJB7Q7Z6W7 309 aaPredicted RBP13.27□□□□□ -0.28
TGFBR3-201ENST00000212355 CNIH3Q8TBE1 160 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms