RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 SLC16A8O95907 504 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 CA3P07451 260 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 PCNAP12004 261 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 COX7A2P14406 83 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 MYOGP15173 224 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 FSHRP23945 695 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 TACR1P25103 407 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 GSTT1P30711 240 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 SRSF11Q05519 484 aaKnown RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 DOC2AQ14183 400 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 PDGFRLQ15198 375 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 GTDC1Q4AE62 458 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 FAM78AQ5JUQ0 283 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 CAPN13Q6MZZ7 669 aaPredicted RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 FKBP9P1Q75LS8 142 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 TRMT11Q7Z4G4 463 aaKnown RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 TMPRSS11BQ86T26 416 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 MSRB3Q8IXL7 192 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 DHRSXQ8N5I4 330 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 TRIML2Q8N7C3 387 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 TERB1Q8NA31 727 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 VN1R2Q8NFZ6 395 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 TSPAN14Q8NG11 270 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 OR52E4Q8NGH9 312 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 OR56A3Q8NH54 315 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 HM13Q8TCT9 377 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 MAGEE2Q8TD90 523 aaPredicted RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 CXorf40AQ8TE69 158 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 GFM2Q969S9 779 aaKnown RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 ARRDC3Q96B67 414 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 ASB16Q96NS5 453 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 MTERF1Q99551 399 aaKnown RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 PKP4Q99569 1192 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 PAIP1Q9H074 479 aaKnown RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 OR2AG1Q9H205 316 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 IKZF5Q9H5V7 419 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 KAT8Q9H7Z6 458 aaKnown RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 CLK4Q9HAZ1 481 aaKnown RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 VCX3AQ9NNX9 186 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 PAPOLBQ9NRJ5 636 aaKnown RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 DYRK1BQ9Y463 629 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 PCDHB14Q9Y5E9 798 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 COMMD3-BMI1R4GMX3 469 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 ALPK3Q96L96 1907 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 TCF20Q9UGU0 1960 aaKnown RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 TRBV5-3A0A0A0MS03 114 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 EME2A4GXA9 379 aaPredicted RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 HEPACAM2A8MVW5 462 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 H3BNH8 94 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 GNGT2O14610 69 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 PRAMEF4O60810 478 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 EPN2O95208 641 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 ALBP02768 609 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 TFAP2AP05549 437 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 RETP07949 1114 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 MYF6P23409 242 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 HPCAL1P37235 193 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 CAPGP40121 348 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 MTHFRP42898 656 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 ASMTP46597 345 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 SLC6A11P48066 632 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 NRIP1P48552 1158 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 HNRNPFP52597 415 aaKnown RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 TBPL1P62380 186 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 ABHD18Q0P651 414 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 TSTA3Q13630 321 aaPredicted RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 ZNF234Q14588 700 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 STARD3Q14849 445 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 RBBP5Q15291 538 aaKnown RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 NADK2Q4G0N4 442 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 SPIN4Q56A73 249 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 PAGE2BQ5JRK9 111 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 C9orf64Q5T6V5 341 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 PRAMEF9Q5VWM5 478 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 OR4F3Q6IEY1 312 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 TTC33Q6PID6 262 aaPredicted RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 ADGRD2Q7Z7M1 963 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 TRIM74Q86UV6 250 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 CFAP206Q8IYR0 622 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 PHACTR4Q8IZ21 702 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 CLEC4FQ8N1N0 589 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 CPA6Q8N4T0 437 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 LILRA3Q8N6C8 439 aaPredicted RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 FBXO15Q8NCQ5 510 aaPredicted RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 WDR20Q8TBZ3 569 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 SUSD6Q92537 303 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 REXO5Q96IC2 774 aaKnown RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 FCRL1Q96LA6 429 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 ITM2CQ9NQX7 267 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 FAM120CQ9NX05 1096 aaKnown RBP8.01□□□□□ -1.13
VAMP3-201ENST00000054666 CIDEBQ9UHD4 219 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 PPT2Q9UMR5 302 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 DMTF1Q9Y222 760 aa8.01□□□□□ -1.13
VAMP3-201ENST00000054666 MUC22E2RYF6 1773 aaPredicted RBP8□□□□□ -1.13
VAMP3-201ENST00000054666 TBC1D3BA6NDS4 549 aa8□□□□□ -1.13
VAMP3-201ENST00000054666 AREL1O15033 823 aa8□□□□□ -1.13
VAMP3-201ENST00000054666 ACOX3O15254 700 aa8□□□□□ -1.13
VAMP3-201ENST00000054666 SPINT1O43278 529 aa8□□□□□ -1.13
VAMP3-201ENST00000054666 C1orf105O95561 183 aa8□□□□□ -1.13
VAMP3-201ENST00000054666 GSNP06396 782 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms