RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Sash3Q8K352 380 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Swsap1Q8VCI7 278 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ptgr2Q8VDQ1 351 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Lpcat2bQ9D5U0 516 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Avpr1bQ9WU02 421 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Clec2iQ9WVF9 217 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ttll6A4Q9E8 822 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Mllt6B1AR10 1109 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cyp2j8G3UZ38 503 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Bcl2a1dO55179 172 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ruvbl1P60122 456 aaKnown RBP11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gnb5P62881 395 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 EdnraQ61614 427 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Scn4bQ7M729 228 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Svs2Q8BS30 375 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 ReltQ8BX43 436 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Rin1Q921Q7 763 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Nudt8Q9CR24 210 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dsn1Q9CYC5 348 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 CtsrQ9JIA9 334 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Mab21l1O70299 359 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cyp2b10P12791 500 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 FpgsP48760 587 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Znf366Q6NS86 746 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr1288Q7TQY0 312 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Lrrc20Q8CI70 184 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 PhykplQ8R1K4 467 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Adam25Q9R159 760 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 H2afb1S4R1E0 115 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 H2afb3S4R1G7 115 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm37596A0A0A6YXL2 336 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Zfp946F6VWU8 523 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc7a2P18581 657 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Fgf1P61148 155 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 WasP70315 520 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 ArhgdibQ61599 200 aaKnown RBP11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Srd5a1Q68FF9 255 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Fam205cQ80YD3 371 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cnppd1Q8K158 407 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 SncgQ9Z0F7 123 aaKnown RBP11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm14147A2AQX6 640 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 TrhrP21761 393 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Aarsd1Q3THG9 412 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc30a6Q8BJM5 460 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tgm6Q8BM11 706 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gpr21Q8BX79 349 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Pcdhga11Q91XY8 933 aa11.7□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc22a1O08966 556 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gpr142Q7TQN9 365 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Il17reQ8BH06 637 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Smoc1Q8BLY1 463 aaKnown RBP11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr183Q8VFB9 309 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Itgb3bpQ9CQ82 176 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 SrpraQ9DBG7 636 aaKnown RBP11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Htr3bQ9JHJ5 437 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Rimbp3Q3V0F0 1606 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm7233E9PZI8 198 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm9732F6QVC4 198 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm8104K7N744 198 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Scrg1O88745 98 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cxcr2P35343 359 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 MatkP41242 505 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Hsd11b1P50172 292 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Serpina7P61939 418 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Timm8a2Q4FZG7 97 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Orm3Q63805 206 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Spin4Q8K1L2 249 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Hbp1Q8R316 516 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ogfrl1Q8VE52 464 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr665Q8VG79 316 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cts3Q91ZD5 332 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 OptcQ920A0 328 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Get4Q9D1H7 327 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dcdc2bF7BCK0 340 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tuba1bP05213 451 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ndst2P52850 883 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tuba1aP68369 451 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Prdx5P99029 210 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cd300lgQ1ERP8 331 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Rasa4Q6PFQ7 802 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Capn8Q91VA3 703 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc12a9Q99MR3 914 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Cyp3a41aQ9JMA7 504 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Slc39a1Q9QZ03 324 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tpk1Q9R0M5 243 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gys1Q9Z1E4 738 aaKnown RBP11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Nwd1A6H603 1563 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm21560D3Z7A4 205 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 C87414E9PWI7 475 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Gm3138K7N754 218 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Limk2O54785 638 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tuba1cP68373 449 aaKnown RBP11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Btg1-ps1Q3V0S2 161 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Btg1-ps2Q3V0X0 161 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Brsk1Q5RJI5 778 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Olfr394Q8VGR5 310 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Ap1m2Q9WVP1 423 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Dusp8O09112 663 aa11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Phb2O35129 299 aaKnown RBP11.69□□□□□ -0.54
Trim56-201ENSMUST00000054384 Tnfrsf18O35714 228 aa11.69□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms