RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Nt5c1bQ91YE9 573 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Utp11Q9CZJ1 253 aaKnown RBP8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Hhipl2Q9D2G9 717 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr701Q9D3U9 316 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Bpifa3Q9D9J8 232 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Plin3Q9DBG5 437 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Poc5Q9DBS8 558 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 C1qtnf3Q9ES30 246 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 FarsbQ9WUA2 589 aaKnown RBP8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fer1l5P0DM40 2038 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 P01675 107 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 P01676 107 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 P01677 107 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 P01678 107 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Phxr1P15973 60 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Hnf4aP49698 474 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fam196aQ3USH1 422 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 ChukQ60680 745 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Capn11Q6J756 714 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Chst10Q6PGK7 356 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Serpina12Q7TMF5 413 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Znf410Q8BKX7 478 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Piwil4Q8CGT6 848 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Nsl1Q8K305 281 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Dusp15Q8R4V2 235 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Stx18Q8VDS8 334 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 4921530L21RikQ9CQ47 274 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 TesclQ9DAJ7 231 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cbll1Q9JIY2 491 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ascl3Q9JJR7 174 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Slamf1Q9QUM4 343 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ptpn4Q9WU22 926 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Nme4Q9WV84 186 aa8.45□□□□□ -1.06
Trim39-201ENSMUST00000042717 Adamts20P59511 1906 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tcp11x2A2AEI7 503 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Skint1A7TZE6 364 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gm10354K7N6A0 256 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Dgcr6O35347 198 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Psmb5O55234 264 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ncam1P13595 1115 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 GhrhrP32082 423 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Actr1aP61164 376 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Akt2Q60823 481 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Sf1Q64213 653 aaKnown RBP8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 VclQ64727 1066 aaKnown RBP8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 AptxQ7TQC5 342 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Mblac2Q8BL86 279 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fbxl8Q8CIG9 374 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Actr1bQ8R5C5 376 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 EdaraddQ8VHX2 208 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Arhgef3Q91X46 524 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 SmtnQ921U8 923 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Rab28Q99KL7 221 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Klhl28Q9CR40 571 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Paip2Q9D6V8 124 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cldn22Q9D7U6 220 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Gm13088A2AGW6 460 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 MipepA6H611 711 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Sap18O55128 153 aaKnown RBP8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 AurkcO88445 282 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 P06324 132 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Zp3P10761 424 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Csf2rb2P26954 878 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 TfamP40630 243 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Id2P41136 134 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 ThraP63058 492 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Grin2cQ01098 1239 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ccser2Q3UHI0 833 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Marveld2Q3UZP0 555 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Jak3Q62137 1100 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ostf1Q62422 215 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Prr14Q7TPN9 612 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr1344Q7TQV3 321 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Clec18aQ7TSQ1 534 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 MtdhQ80WJ7 579 aaKnown RBP8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Tyw1Q8BJM7 721 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Eme1Q8BJW7 570 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Vps26bQ8C0E2 336 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Trnt1Q8K1J6 434 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Agfg1Q8K2K6 561 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Cnot6Q8K3P5 557 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr449Q8VGW8 311 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Sorcs3Q8VI51 1219 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 MydgfQ9CPT4 166 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 TcimQ9D915 106 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Olfr630Q9EQQ7 319 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Ing2Q9ESK4 281 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fiz1Q9WTJ4 500 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Nupr1Q9WTK0 80 aa8.44□□□□□ -1.06
Trim39-201ENSMUST00000042717 Plxnd1Q3UH93 1925 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Actl10A2AKE7 346 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Zfp352A2AML7 551 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Fam83cA2ARK0 776 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Xkr6E9Q6C8 638 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Elovl3O35949 271 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Sh3pxd2aO89032 1124 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Hoxa9P09631 271 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 RapsnP12672 412 aa8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 Hcls1P49710 486 aaKnown RBP8.43□□□□□ -1.06
Trim39-201ENSMUST00000042717 GckP52792 465 aa8.43□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 14 ms