RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Kcnj5P48545 419 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 UradQ283N4 178 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Vrk2Q8BN21 503 aaKnown RBP16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ska1Q9CPV1 254 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr596F8VQ26 312 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Dusp8O09112 663 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 ParpbpQ6IRT3 573 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cdh24Q6PFX6 781 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tas2r136Q7TQA8 305 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tmem131lQ3U3D7 1597 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cyp2a4P15392 494 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 PgrQ00175 926 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Mocs1Q5RKZ7 636 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tm9sf4Q8BH24 643 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Adamts2Q8C9W3 1213 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Wrnip1Q91XU0 660 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Pcdha6Q91Y14 946 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Pcdha2Q91Y17 948 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ptgdr2Q9Z2J6 382 aa16.25■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 AgxtO35423 414 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Sypl2O89104 264 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Frmd6Q8C0V9 622 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Scn3aA2ASI5 1947 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 PtpraP18052 829 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gna12P27600 379 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Rcbtb1Q6NXM2 531 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cyp2c54Q6XVG2 490 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cep68Q8C0D9 733 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 4932443I19RikA0A286YE38 169 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Kctd17E0CYQ0 296 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cer1O55233 272 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Mrgprb1Q3UG61 350 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 EfsQ64355 560 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Smpd4Q6ZPR5 823 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 RhdQ8CF94 418 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Pth2rQ91V95 546 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gm8159E9Q0R1 267 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 C9P06683 548 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 C6.1alQ7M757 291 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Sec16bQ91XT4 1051 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Pcdhb4Q91XZ6 784 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Dsg2O55111 1122 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Spin1Q61142 262 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Pgm2Q7TSV4 620 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Adamts14E9PX39 1209 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Vmn2r48E9Q5D8 855 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Rem1O35929 297 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 AdaP03958 352 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 OstnP61364 130 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tmem199Q5SYH2 208 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Trpm4Q7TN37 1213 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gabbr2Q80T41 940 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Wdr48Q8BH57 676 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 MynnQ99MD8 610 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ggt5Q9Z2A9 573 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Zfp600A2A7V0 737 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Kbtbd6E9PYD7 486 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Coro1aO89053 461 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Lrrc58Q3UGP9 366 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Steap2Q8BWB6 489 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gk5Q8BX05 534 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Chmp1aQ921W0 196 aa16.24■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr456B2RT27 312 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Rplp0P14869 317 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Dpep1P31428 410 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Nudt1P53368 156 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ctnnb1Q02248 781 aaKnown RBP16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 AcdQ5EE38 416 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr458Q8VF80 313 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr457Q8VGP5 313 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cbr4Q91VT4 236 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tktl1Q99MX0 595 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Rex2A2AWF2 685 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cyp4a31F8WGU9 509 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Vmn2r102L7N279 857 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Gm6401L7N2C0 213 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Glt28d2Q8BML3 165 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Epha10Q8BYG9 1007 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ildr1Q8CBR1 537 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Exd1Q8CDF7 570 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Ugt2b1Q8R084 529 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Trem2Q99NH8 227 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Nr4a3Q9QZB6 627 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Xpnpep3B7ZMP1 506 aaKnown RBP16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 LynP25911 512 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Polr3bP59470 1133 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Pip5k1bP70181 539 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Kcnq1P97414 668 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Mfsd3Q5U419 412 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Cachd1Q6PDJ1 1288 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 PdprQ7TSQ8 878 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Lrrc19Q8BZT5 364 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Tmem63bQ3TWI9 832 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Casp9Q8C3Q9 454 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Samd7Q8C8Y5 445 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Olfr665Q8VG79 316 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Vmn2r34E9PVI0 852 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Vmn2r41E9Q5C7 852 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Vmn2r40F6W043 852 aa16.23■□□□□ 0.19
Ccdc88a-201ENSMUST00000040182 Vmn2r37F8VQD3 802 aa16.23■□□□□ 0.19
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms