RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Q9CPZ3 230 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 NarfQ9CYQ7 462 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Adck1Q9D0L4 525 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ovca2Q9D7E3 225 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Plscr2Q9DCW2 307 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 EefsecQ9JHW4 583 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Dio2Q9Z1Y9 266 aa10.63□□□□□ -0.71
Msh3-201ENSMUST00000022220 Pde4dipQ80YT7 2224 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Xlr5bA2BI50 236 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Kif28pD3YXS5 1028 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Serpina3jD3Z451 420 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Edil3O35474 480 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Akap3O88987 864 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Pdx1P52946 284 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Myadml2Q08AU7 307 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Slc6a3Q61327 619 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr169Q7TS53 313 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ubash3bQ8BGG7 638 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Tspan9Q8BJU2 239 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Sumf2Q8BPG6 308 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Csnk1g1Q8BTH8 459 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 4931406P16RikQ8C5X1 1059 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Steap3Q8CI59 488 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ints10Q8K2A7 710 aaKnown RBP10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ppp1r14cQ8R4S0 164 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr1311Q8VET0 312 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Slc35b2Q91ZN5 431 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cyp4f3Q99N16 524 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Wdr89Q9D0R9 386 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Tbc1d20Q9D9I4 402 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Upf1Q9EPU0 1124 aaKnown RBP10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ndst3Q9EQH7 873 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Il22Q9JJY9 179 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Btbd35f21A0A140T8Q5 498 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Btbd35f22J3QN64 498 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm14496K7N5U4 849 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm3642K7N6V4 267 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 AlyrefO08583 255 aaKnown RBP10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Slc2a2P14246 523 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Htr3aP23979 487 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 CcnfP51944 777 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Lrrc58Q3UGP9 366 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Angptl1Q640P2 490 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Actr3bQ641P0 418 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Zc4h2Q68FG0 224 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr1252Q7TQZ2 314 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ddx52Q8K301 598 aaKnown RBP10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 MpstQ99J99 297 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cmtm6Q9CZ69 183 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Spock2Q9ER58 423 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Baz2bA2AUY4 2123 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 UtrnE9Q6R7 3430 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Adh6bA0A1D5RMB0 384 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr1123A2AT85 323 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Zfp362B1ASA5 418 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Nlrp12E9Q5R7 1054 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Fignl2J3QK54 644 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Neurod4O09105 330 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ptch2O35595 1182 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Klrb1cP27814 223 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 WarsP32921 481 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 ArsaP50428 506 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Lim2P56563 173 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 E2f2P56931 443 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm7030Q0WXH6 285 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Fpr-rs6Q3SXG2 339 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Parp8Q3UD82 852 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Nr0b2Q62227 260 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Tead4Q62296 427 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Ccdc85bQ6PDY0 202 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cdh7Q8BM92 785 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 PisdQ8BSF4 406 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Fads1Q920L1 447 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Coro6Q920M5 471 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 PclafQ9CQX4 110 aaKnown RBP10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 HaspinQ9Z0R0 754 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Mia3Q8BI84 1930 aa10.62□□□□□ -0.71
Msh3-201ENSMUST00000022220 Nup205A0A0J9YUD5 2061 aaKnown RBP10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Rbbp6P97868 1790 aaKnown RBP10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Slc23a4A0A0J9YUX7 615 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Mgat4eA6H684 439 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Vmn2r115E9Q0E7 857 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Sap18O55128 153 aaKnown RBP10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cyp8b1O88962 500 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Tuba3aP05214 450 aaKnown RBP10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Klk1b8P07628 261 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Bmpr1aP36895 532 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Cxcl12P40224 93 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Lhx3P50481 400 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Hpcal1P62748 193 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Rbm15Q0VBL3 962 aaKnown RBP10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Serpina3fQ80X76 445 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Rmnd5aQ80YQ8 391 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Gm4922Q8C0N0 497 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Txndc11Q8K2W3 948 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr382Q8VF79 312 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Olfr1208Q8VG47 308 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Klk6Q91Y82 253 aa10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Q9D1K7 174 aaKnown RBP10.61□□□□□ -0.71
Msh3-201ENSMUST00000022220 Glod5Q9D8I3 148 aa10.61□□□□□ -0.71
Retrieved 100 of 22,080 RNA–protein pairs in 43.6 ms