RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 PfkpQ9WUA3 784 aaKnown RBP16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 Tdrd6P61407 2134 aa16.01■□□□□ 0.15
Shh-201ENSMUST00000002708 MndalD0QMC3 538 aaKnown RBP16■□□□□ 0.15
Shh-201ENSMUST00000002708 Vmn1r176G3UW31 304 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Ifngr1P15261 477 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Dsc3P55850 896 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Gm7030Q0WXH6 285 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Zdhhc11Q14AK4 347 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Naa11Q3UX61 218 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Itga7Q61738 1179 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Cpsf6Q6NVF9 551 aaKnown RBP16■□□□□ 0.15
Shh-201ENSMUST00000002708 Scn4bQ7M729 228 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Olfr814Q7TRH4 310 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 LdahQ8BVA5 326 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Rbm4Q8C7Q4 361 aaKnown RBP16■□□□□ 0.15
Shh-201ENSMUST00000002708 Tmem203Q8R235 136 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Rbm4bQ8VE92 357 aaKnown RBP16■□□□□ 0.15
Shh-201ENSMUST00000002708 Olfr448Q8VES9 310 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Olfr1208Q8VG47 308 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 SelenomQ8VHC3 145 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Emid1Q91VF5 444 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 EbplQ9D0P0 206 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Nudt14Q9D142 222 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Fkbp1bQ9Z2I2 108 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Nlrc5C3VPR6 1915 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Vmn2r94E9PZK8 818 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Rhox2hK7N6P1 191 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Cxcr3O88410 367 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 LdhcP00342 332 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 PgfP49764 158 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Txndc15Q6P6J9 344 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Dcaf13Q6PAC3 445 aaKnown RBP16■□□□□ 0.15
Shh-201ENSMUST00000002708 1700001K19RikQ80ZT1 219 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 MylipQ8BM54 445 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Phf11aQ8BVM9 293 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Sit1Q8C503 180 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Olfr807Q8VGI9 311 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Olfr1047Q8VGS0 319 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Ndufs1Q91VD9 727 aaKnown RBP16■□□□□ 0.15
Shh-201ENSMUST00000002708 Adgrl4Q923X1 739 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 SardhQ99LB7 919 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Marc1Q9CW42 340 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Mcm8Q9CWV1 833 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 D10Jhu81eQ9D172 266 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Pus10Q9D3U0 527 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Kbtbd12Q9D618 625 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Usp12Q9D9M2 370 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 CenpkQ9ESN5 271 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Cog8Q9JJA2 640 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Tgm1Q9JLF6 815 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Oaz3Q9R109 243 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 HaspinQ9Z0R0 754 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Rad21l1A2AU37 552 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Matn3O35701 481 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Cd93O89103 644 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 P01631 113 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 P01679 107 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Pcgf5Q3UK78 256 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Nfatc2Q60591 927 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 PtprnQ60673 979 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Prap1Q80XD8 149 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 PisdQ8BSF4 406 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Nrip1Q8CBD1 1161 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 CenpiQ8K1K4 746 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Ptgr2Q8VDQ1 351 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Olfr398Q8VFY0 314 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Depdc7Q91WS7 511 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Dusp26Q9D700 211 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Smg9Q9DB90 520 aa16■□□□□ 0.15
Shh-201ENSMUST00000002708 Unc80Q8BLN6 3261 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 BC024063A0A1W2P7G7 749 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Otud3B1AZ99 396 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Vmn2r118E9Q1C1 853 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Pole2O54956 527 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Gpr50O88495 591 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Hnf1bP27889 558 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Gjb5Q02739 271 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Il1rapQ61730 570 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Eif2b4Q61749 524 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 DgkbQ6NS52 802 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Tnpo3Q6P2B1 923 aaKnown RBP15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 FukQ7TMC8 1090 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Vmn2r81Q80Z09 865 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 SntnQ8C9X1 147 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Rcor1Q8CFE3 480 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Lsm14aQ8K2F8 462 aaKnown RBP15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Ing3Q8VEK6 421 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 PxnQ8VI36 591 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Sp7Q8VI67 428 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Arrb2Q91YI4 410 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Kat8Q9D1P2 458 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Cped1B2RX70 1026 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Mybpc1D3YU50 1127 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Clk3O35492 638 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 AmbnO55189 407 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Bard1O70445 765 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Il1aP01582 270 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 LckP06240 509 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Nfkb1P25799 971 aa15.99■□□□□ 0.15
Shh-201ENSMUST00000002708 Hoxd10P28359 340 aa15.99■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms