RNA–Protein interactions for RNA: ENST00000641947.1

PHGDH-232, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,774 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-232ENST00000641947 LINC01555Q8NAE3 123 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 FERD3LQ96RJ6 166 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 SPNS1Q9H2V7 528 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 SLC40A1Q9NP59 571 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 AIG1Q9NVV5 245 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 CCDC167Q9P0B6 97 aa17.02■□□□□ 0.31
PHGDH-232ENST00000641947 C9JVG2 144 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 GYG2O15488 501 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 GSC2O15499 205 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 UGDHO60701 494 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 RASGRP1O95267 797 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 DMWDQ09019 674 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 EIF2B5Q13144 721 aaKnown RBP17.01■□□□□ 0.31
PHGDH-232ENST00000641947 RPE65Q16518 533 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 CYP2A13Q16696 494 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 ATP6AP1LQ52LC2 224 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 RFTN2Q52LD8 501 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-232ENST00000641947 AGKQ53H12 422 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 LIPJQ5W064 366 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 LAYNQ6UX15 382 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 SPATA19Q7Z5L4 167 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 HID1Q8IV36 788 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 FNDC5Q8NAU1 212 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 RP9Q8TA86 221 aaKnown RBP17.01■□□□□ 0.31
PHGDH-232ENST00000641947 WDR20Q8TBZ3 569 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 TEX37Q96LM6 180 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 CCDC177Q9NQR7 707 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-232ENST00000641947 SDR39U1Q9NRG7 319 aaPredicted RBP17.01■□□□□ 0.31
PHGDH-232ENST00000641947 SIT1Q9Y3P8 196 aa17.01■□□□□ 0.31
PHGDH-232ENST00000641947 THADAQ6YHU6 1953 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 A0A1W2PPV9 198 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 A6NCN8 305 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 A8MUI8 341 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 KRT6AP02538 564 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 KRT6BP04259 564 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 RPN2P04844 631 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 THEGLP0DJG4 465 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 ITGAXP20702 1163 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 ZFP36L2P47974 494 aaKnown RBP17■□□□□ 0.31
PHGDH-232ENST00000641947 KRT6CP48668 564 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 CUL3Q13618 768 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 CYLC2Q14093 348 aaPredicted RBP17■□□□□ 0.31
PHGDH-232ENST00000641947 FZD2Q14332 565 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 KIF19Q2TAC6 998 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 AP5B1Q2VPB7 878 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 ZNF542PQ5EBM4 170 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 GRHL2Q6ISB3 625 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 SLC30A9Q6PML9 568 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 TMPRSS11BQ86T26 416 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 SELENOMQ8WWX9 145 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 RCN3Q96D15 328 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 CAMK1GQ96NX5 476 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 XKR8Q9H6D3 395 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 GPRC5BQ9NZH0 403 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 FBP2O00757 339 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 TOR1BO14657 336 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 CLGNO14967 610 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 PI15O43692 258 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 WNT1P04628 370 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 CELA2BP08218 269 aaPredicted RBP17■□□□□ 0.31
PHGDH-232ENST00000641947 THRAP10827 490 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 MTHFD1P11586 935 aaKnown RBP17■□□□□ 0.31
PHGDH-232ENST00000641947 GNAZP19086 355 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 PSMB5P28074 263 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 CASP2P42575 452 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 FRG2Q64ET8 278 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 CWF19L1Q69YN2 538 aaKnown RBP17■□□□□ 0.31
PHGDH-232ENST00000641947 WDR34Q96EX3 536 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 FRG2BQ96QU4 278 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 RTKNQ9BST9 563 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 BRINP2Q9C0B6 783 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 C1orf21Q9H246 121 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 ELOVL6Q9H5J4 265 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 PFDN4Q9NQP4 134 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17■□□□□ 0.319e-8■■■□□ 19.1
PHGDH-232ENST00000641947 DLGAP2Q9P1A6 1054 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 SNX6Q9UNH7 406 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 POLR3HQ9Y535 204 aaPredicted RBP17■□□□□ 0.31
PHGDH-232ENST00000641947 KCNE2Q9Y6J6 123 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 DGKBQ9Y6T7 804 aa17■□□□□ 0.31
PHGDH-232ENST00000641947 TECTAO75443 2155 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 A0A0C4DFX4 3053 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 SPAG17Q6Q759 2223 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 SPTY2D1-AS1A0A0U1RR47 76 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 METTL12A8MUP2 240 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 SLC28A1O00337 649 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 RGS14O43566 566 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 IDO1P14902 403 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 BCKDHBP21953 392 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 ACTR1BP42025 376 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 MRPL19P49406 292 aaKnown RBP16.99■□□□□ 0.31
PHGDH-232ENST00000641947 ACTR1AP61163 376 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 RPL38P63173 70 aaKnown RBP16.99■□□□□ 0.31
PHGDH-232ENST00000641947 ELF3P78545 371 aaPredicted RBP16.99■□□□□ 0.31
PHGDH-232ENST00000641947 MXRA7P84157 204 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 LRP8Q14114 963 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 ARHGAP19Q14CB8 494 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 GSTA3Q16772 222 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 PRAMEF14Q5SWL7 426 aa16.99■□□□□ 0.31
PHGDH-232ENST00000641947 PRAMEF13Q5VWM6 474 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms