RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 SUPT3HB4E1H0 165 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 UBXN8O00124 270 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 SLC16A5O15375 505 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 NVLO15381 856 aaKnown RBP9.12□□□□□ -0.95
PHGDH-228ENST00000641847 PSIP1O75475 530 aaKnown RBP9.12□□□□□ -0.95
PHGDH-228ENST00000641847 SUPT3HO75486 399 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 MATN4O95460 622 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 CATP04040 527 aaKnown RBP9.12□□□□□ -0.95
PHGDH-228ENST00000641847 ENO2P09104 434 aaPredicted RBP9.12□□□□□ -0.95
PHGDH-228ENST00000641847 RBP1P09455 135 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 CYP2A7P20853 494 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 MAP4P27816 1152 aaKnown RBP9.12□□□□□ -0.95
PHGDH-228ENST00000641847 ACADLP28330 430 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 HALP42357 657 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 ATP1A2P50993 1020 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 SLC18A1P54219 525 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 KCNAB2Q13303 367 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 CLCA4Q14CN2 919 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 ELOCQ15369 112 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 TGIF1Q15583 401 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 PPP1R3AQ16821 1122 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.12□□□□□ -0.95
PHGDH-228ENST00000641847 HHATQ5VTY9 493 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 DUS1LQ6P1R4 473 aaKnown RBP9.12□□□□□ -0.95
PHGDH-228ENST00000641847 GUSBP11Q6P575 273 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 WASH2PQ6VEQ5 465 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 ZYG11AQ6WRX3 759 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 GKN2Q86XP6 184 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 GPSM1Q86YR5 675 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 ARFGAP2Q8N6H7 521 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 STAG3L4Q8TBR4 150 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 RDH11Q8TC12 318 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 DENND1AQ8TEH3 1009 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 ASB11Q8WXH4 323 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 C12orf66Q96MD2 445 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 ATOH8Q96SQ7 321 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 INSM2Q96T92 566 aaPredicted RBP9.12□□□□□ -0.95
PHGDH-228ENST00000641847 PAIP2Q9BPZ3 127 aaKnown RBP9.12□□□□□ -0.95
PHGDH-228ENST00000641847 CNOT10Q9H9A5 744 aaKnown RBP9.12□□□□□ -0.95
PHGDH-228ENST00000641847 WASH6PQ9NQA3 447 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 IMP3Q9NV31 184 aaKnown RBP9.12□□□□□ -0.95
PHGDH-228ENST00000641847 FAM53CQ9NYF3 392 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 UTP6Q9NYH9 597 aaKnown RBP9.12□□□□□ -0.95
PHGDH-228ENST00000641847 NUDT4Q9NZJ9 180 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 TAAR2Q9P1P5 351 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 CPSF2Q9P2I0 782 aaKnown RBP9.12□□□□□ -0.95
PHGDH-228ENST00000641847 TUBD1Q9UJT1 453 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 DOLKQ9UPQ8 538 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 ASF1AQ9Y294 204 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 OARD1Q9Y530 152 aa9.12□□□□□ -0.95
PHGDH-228ENST00000641847 CFAP20Q9Y6A4 193 aaKnown RBP9.12□□□□□ -0.95
PHGDH-228ENST00000641847 RP1L1Q8IWN7 2480 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-228ENST00000641847 NCF1BA6NI72 391 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-228ENST00000641847 NCF1CA8MVU1 366 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-228ENST00000641847 ARHGEF33A8MVX0 844 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 B4DGG1 531 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 TARM1B6A8C7 271 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 GFYI3L273 518 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 AQP9O43315 295 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 NOBOXO60393 691 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 SMIM24O75264 130 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 C1orf105O95561 183 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 S100BP04271 92 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-228ENST00000641847 RPN2P04844 631 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 SBK3P0C264 359 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 GIMD1P0DJR0 217 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 MYL2P10916 166 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 MTHFD1P11586 935 aaKnown RBP9.11□□□□□ -0.95
PHGDH-228ENST00000641847 F3P13726 295 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 NCF1P14598 390 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-228ENST00000641847 CHN1P15882 459 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 TAC1P20366 129 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 ETV4P43268 484 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 SERPINB4P48594 390 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 PCLAFQ15004 111 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 TGFBIQ15582 683 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 RPE65Q16518 533 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 PHKG1Q16816 387 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 CAPRIN2Q6IMN6 1127 aaKnown RBP9.11□□□□□ -0.95
PHGDH-228ENST00000641847 ABRAXAS1Q6UWZ7 409 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 RASGRP3Q8IV61 690 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 DCUN1D3Q8IWE4 304 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 TMEM151AQ8N4L1 468 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 OR5AR1Q8NGP9 310 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 TFGQ92734 400 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-228ENST00000641847 DLG3Q92796 817 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 HGH1Q9BTY7 390 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 SLC12A9Q9BXP2 914 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 TRIT1Q9H3H1 467 aaKnown RBP9.11□□□□□ -0.95
PHGDH-228ENST00000641847 PARVBQ9HBI1 364 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 INTS9Q9NV88 658 aaKnown RBP9.11□□□□□ -0.95
PHGDH-228ENST00000641847 ARL15Q9NXU5 204 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 CD274Q9NZQ7 290 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 SCHIP1Q9P0W5 487 aaPredicted RBP9.11□□□□□ -0.95
PHGDH-228ENST00000641847 COPG2Q9UBF2 871 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 PDE10AQ9Y233 779 aa9.11□□□□□ -0.95
PHGDH-228ENST00000641847 C2CD3Q4AC94 2353 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 PRRC2CQ9Y520 2896 aaKnown RBP9.1□□□□□ -0.95
PHGDH-228ENST00000641847 LY6G6EA0A0G2JKS1 128 aa9.1□□□□□ -0.95
PHGDH-228ENST00000641847 WDR91A4D1P6 747 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms