RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 RRN3P2A6NIE6 340 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 F8W810 466 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 GFRA2O00451 464 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 LDB2O43679 373 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 THP07101 528 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 CYP2A7P20853 494 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 FDXRP22570 491 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 DNAJB1P25685 340 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 CYP4F8P98187 520 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 CPSF6Q16630 551 aaKnown RBP eCLIP13.4□□□□□ -0.26
SCARB2-227ENST00000640957 ANGPTL8Q6UXH0 198 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 GPSM1Q86YR5 675 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 TIGD4Q8IY51 512 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 TRMT61AQ96FX7 289 aaKnown RBP13.4□□□□□ -0.26
SCARB2-227ENST00000640957 NSUN3Q9H649 340 aaKnown RBP13.4□□□□□ -0.26
SCARB2-227ENST00000640957 ABCB8Q9NUT2 735 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 PRG3Q9Y2Y8 225 aaPredicted RBP13.4□□□□□ -0.26
SCARB2-227ENST00000640957 PRKAB1Q9Y478 270 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 ISPDA4D126 451 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 CENPBD1B2RD01 187 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 SNX4O95219 450 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 GLUD1P00367 558 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 SOX3P41225 446 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 OR1E2P47887 323 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 RFX2P48378 723 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 ARHGDIAP52565 204 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 HUNKP57058 714 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 ZNF598Q86UK7 904 aaKnown RBP13.4□□□□□ -0.26
SCARB2-227ENST00000640957 AMIGO1Q86WK6 493 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 PIANPQ8IYJ0 282 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 MAL2Q969L2 176 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 APOL4Q9BPW4 351 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 SYT17Q9BSW7 474 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 CATSPERZQ9NTU4 200 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 TMEM184CQ9NVA4 438 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 GPR182O15218 404 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 CPSF4O95639 269 aaKnown RBP13.4□□□□□ -0.26
SCARB2-227ENST00000640957 BMP1P13497 986 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 AKT1P31749 480 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 CHRNEQ04844 493 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 RAD51Q06609 339 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 SETMARQ53H47 684 aaPredicted RBP13.4□□□□□ -0.26
SCARB2-227ENST00000640957 LRRC66Q68CR7 880 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 FAAH2Q6GMR7 532 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 NADSYN1Q6IA69 706 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 KDELC1Q6UW63 502 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 SUSD1Q6UWL2 747 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 IQCF2Q8IXL9 164 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 OR56A4Q8NGH8 313 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 OR4L1Q8NH43 312 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 APH1BQ8WW43 257 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 DPF3Q92784 378 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 EGFL8Q99944 293 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 RLIMQ9NVW2 624 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 GPRC5BQ9NZH0 403 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 HSPB11Q9Y547 144 aa13.4□□□□□ -0.26
SCARB2-227ENST00000640957 CDH23Q9H251 3354 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 MUSKO15146 869 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 ADRA2AP08913 450 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 PNPLA4P41247 253 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 ATN1P54259 1190 aaPredicted RBP13.39□□□□□ -0.27
SCARB2-227ENST00000640957 ZRANB3Q5FWF4 1079 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 CACHD1Q5VU97 1274 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 ZNF551Q7Z340 670 aaPredicted RBP13.39□□□□□ -0.27
SCARB2-227ENST00000640957 NOXA1Q86UR1 476 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 SETD9Q8NE22 299 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 OR2A14Q96R47 310 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 PRKD2Q9BZL6 878 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 IPPKQ9H8X2 491 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 DCAF13Q9NV06 445 aaKnown RBP13.39□□□□□ -0.27
SCARB2-227ENST00000640957 NAALAD2Q9Y3Q0 740 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 ARIH1Q9Y4X5 557 aaPredicted RBP13.39□□□□□ -0.27
SCARB2-227ENST00000640957 ANKRD28O15084 1053 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 HPRP00739 348 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 RPLP0P05388 317 aaKnown RBP13.39□□□□□ -0.27
SCARB2-227ENST00000640957 POU3F3P20264 500 aaPredicted RBP13.39□□□□□ -0.27
SCARB2-227ENST00000640957 ACVR2AP27037 513 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 RYKP34925 604 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 OR3A3P47888 321 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 PPP3CCP48454 512 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 CLCN7P51798 805 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 CAV3P56539 151 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 ST3GAL4Q11206 333 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 LACC1Q8IV20 430 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 CFAP52Q8N1V2 620 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 SVOPLQ8N434 492 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 PYURFQ96I23 114 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 ZBTB18Q99592 522 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 HDHD5Q9BXW7 423 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 TAS2R13Q9NYV9 303 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 ST3GAL5Q9UNP4 418 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 MED16Q9Y2X0 877 aa13.39□□□□□ -0.27
SCARB2-227ENST00000640957 CIB4A0PJX0 185 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 C17orf102A2RUQ5 167 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 TBKBP1A7MCY6 615 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 PIRO00625 290 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 CDK2AP1O14519 115 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 KERAO60938 352 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 WDR47O94967 919 aa13.38□□□□□ -0.27
SCARB2-227ENST00000640957 APOL3O95236 402 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms